Gene detail

Detailed information of KAF0992384.1 in Henneguya salminicola

Genomic Location: SGJC01000332.1:10782...12561
NR annotation: KAF0992384.1, hypothetical protein HZS_6047 [Henneguya salminicola]
Species Henneguya salminicola · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P29054	Transcription initiation factor IIB OS=Xenopus laevis OX=8355 GN=gtf2b PE=2 SV=1
Q00403	Transcription initiation factor IIB OS=Homo sapiens OX=9606 GN=GTF2B PE=1 SV=1
Q4R3J5	Transcription initiation factor IIB OS=Macaca fascicularis OX=9541 GN=GTF2B PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006822 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00382 all species →	TFIIB	Transcription factor TFIIB repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036915 all species →	Homologous_superfamily	Cyclin-like superfamily	Interproscan
IPR013150 all species →	Domain	Transcription factor TFIIB, cyclin-like domain	Interproscan
IPR000812 all species →	Family	Transcription factor TFIIB	Interproscan
IPR013763 all species →	Domain	Cyclin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11618 all species →	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0017025 all species →	Molecular Function	TBP-class protein binding	Interproscan
GO:0006352 all species →	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0070897 all species →	Biological Process	transcription preinitiation complex assembly	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006367 all species →	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan
GO:0097550 all species →	Cellular Component	transcription preinitiation complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAF0992384.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.