Gene detail

Detailed information of KAF0992815.1 in Henneguya salminicola

Genomic Location: SGJC01000179.1:5803...7800
NR annotation: KAF0992815.1, hypothetical protein HZS_721 [Henneguya salminicola]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5NVD0	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1
Q3MHE2	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1
Q9DAW6	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036285	Homologous_superfamily	PRP4-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR014906	Domain	Pre-mRNA processing factor 4 (PRP4)-like	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19846	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0030621	Molecular Function	U4 snRNA binding	Interproscan
GO:0046540	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan