Gene detail

Detailed information of KAF1740543.1 in Myxobolus squamalis

Genomic Location: scaffold_15821:29...700
NR annotation: KAF1740543.1, hypothetical protein MXB_4039, partial [Myxobolus squamalis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6PE01	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1
Q96DI7	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP40 PE=1 SV=1
Q2HJH6	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP40 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR052234	Family	U5 snRNP Complex Component	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44006	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan