Gene detail

Detailed information of KAF1742439.1 in Myxobolus squamalis

Genomic Location: scaffold_6118:234...1920
NR annotation: KAF1742439.1, hypothetical protein MXB_1920, partial [Myxobolus squamalis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
F1RCY6	Regulator of nonsense transcripts 1 OS=Danio rerio OX=7955 GN=upf1 PE=2 SV=1
Q92900	Regulator of nonsense transcripts 1 OS=Homo sapiens OX=9606 GN=UPF1 PE=1 SV=2
Q9EPU0	Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13087	AAA_12	AAA domain	Domain	Interproscan
PF13086	AAA_11	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041679	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR045055	Family	DNA2/NAM7-like helicase	Interproscan
IPR047187	Domain	Upf1-like, C-terminal helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0000184	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan