Genomic Location: scaffold_3057:393...2805
NR annotation: KAF1743845.1, hypothetical protein MXB_589 [Myxobolus squamalis]
| CDS | ||||
| MXB_589 | ||||
| Transcript |
| rna-gnl|WGS:QWKW|scaffold_3057-snap-0.4-mRNA |
| Protein |
| KAF1743845.1 |
| Uniprot term | Description |
|---|---|
| Q5Z5B2 | Protein argonaute 1D OS=Oryza sativa subsp. japonica OX=39947 GN=AGO1D PE=2 SV=1 |
| Q69UP6 | Protein argonaute 18 OS=Oryza sativa subsp. japonica OX=39947 GN=AGO18 PE=2 SV=1 |
| Q6K972 | Protein argonaute 1C OS=Oryza sativa subsp. japonica OX=39947 GN=AGO1C PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02171 | Piwi | Piwi domain | Family | Interproscan |
| PF02170 | PAZ | PAZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036085 | Homologous_superfamily | PAZ domain superfamily | Interproscan |
| IPR003165 | Domain | Piwi domain | Interproscan |
| IPR003100 | Domain | PAZ domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22891 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003727 | Molecular Function | single-stranded RNA binding | Interproscan |
| GO:0004521 | Molecular Function | RNA endonuclease activity | Interproscan |
| GO:0016246 | Biological Process | regulatory ncRNA-mediated post-transcriptional gene silencing | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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