Detailed information of KAF1744812.1 in Myxobolus squamalis

Genomic Location: scaffold_1211:72...4685
NR annotation: KAF1744812.1, hypothetical protein MXB_3507 [Myxobolus squamalis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZL98DNA-directed RNA polymerase III subunit RPC1 OS=Gallus gallus OX=9031 GN=POLR3A PE=2 SV=1
O14802DNA-directed RNA polymerase III subunit RPC1 OS=Homo sapiens OX=9606 GN=POLR3A PE=1 SV=2
A4IF62DNA-directed RNA polymerase III subunit RPC1 OS=Bos taurus OX=9913 GN=POLR3A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR035698DomainDNA-directed RNA polymerase III subunit RPC1, C-terminalInterproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03018RPC1, POLR3A; DNA-directed RNA polymerase III subunit RPC1EC:2.7.7.6
Transcription machineryko03021deepkoala

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