Detailed information of KAF1744905.1 in Myxobolus squamalis

Genomic Location: scaffold_683:58...4565
NR annotation: KAF1744905.1, hypothetical protein MXB_3188 [Myxobolus squamalis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H9Y6DNA-directed RNA polymerase I subunit RPA2 OS=Homo sapiens OX=9606 GN=POLR1B PE=1 SV=2
Q5REE8DNA-directed RNA polymerase I subunit RPA2 OS=Pongo abelii OX=9601 GN=POLR1B PE=2 SV=1
P70700DNA-directed RNA polymerase I subunit RPA2 OS=Mus musculus OX=10090 GN=Polr1b PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00562RNA_pol_Rpb2_6RNA polymerase Rpb2, domain 6DomainInterproscan
PF04565RNA_pol_Rpb2_3RNA polymerase Rpb2, domain 3DomainInterproscan
PF06883RNA_pol_Rpa2_4RNA polymerase I, Rpa2 specific domain DomainInterproscan
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007120DomainDNA-directed RNA polymerase, subunit 2, hybrid-binding domainInterproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR037033Homologous_superfamilyDNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyInterproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan
IPR007645DomainRNA polymerase Rpb2, domain 3Interproscan
IPR009674DomainDNA-directed RNA polymerase I subunit RPA2, domain 4Interproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

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