Genomic Location: scaffold_1035:257...3872
NR annotation: KAF1745221.1, hypothetical protein MXB_1253, partial [Myxobolus squamalis]
| CDS | ||||
| MXB_1253 | ||||
| Transcript |
| rna-gnl|WGS:QWKW|scaffold_1035-snap-0.13-mRNA |
| Protein |
| KAF1745221.1 |
| Uniprot term | Description |
|---|---|
| Q5ARK3 | Helicase swr1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=swr1 PE=3 SV=2 |
| Q7S133 | Helicase swr-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=crf1-1 PE=3 SV=1 |
| Q4IAK7 | Helicase SWR1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SWR1 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF07529 | HSA | HSA domain | Family | Interproscan |
| PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR014012 | Domain | Helicase/SANT-associated domain | Interproscan |
| IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR050520 | Family | INO80/SWR1 chromatin remodeling helicase | Interproscan |
| IPR000330 | Domain | SNF2, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45685 | HELICASE SRCAP-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000812 | Cellular Component | Swr1 complex | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0042393 | Molecular Function | histone binding | Interproscan |
| GO:0043044 | Biological Process | chromatin remodeling | Interproscan |
| GO:0043486 | Biological Process | obsolete histone exchange | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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