Gene detail

Detailed information of KAF1745234.1 in Myxobolus squamalis

Genomic Location: scaffold_211:3288...5534
NR annotation: KAF1745234.1, hypothetical protein MXB_3160 [Myxobolus squamalis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-gnl|WGS:QWKW|scaffold_211-snap-0.8-mRNA

ATGCCACTAGGTGGAAAAActgatatttgtttttttgataaaactgGAACATTAACAGAGGATCAAATTTTGCTTGAGGGTATGGGCGAAAAGGTTTTGAGCTTTCAAAATCTTCCAATAGAGTCCATAATAAGCCTCATTGGTTGTACATCGgtatttaattacaaaaatcgGGTTATAGGAGATCCTATCGACACAGCACTGATTCGTGTCTTTAAATGCACGGTCAGCGATGATTATATCCAAACAACCTTCCCTCTTTCTCTTACAGTTAAAGCTTGTGTCAAATTTTCGTTTGAATCGTCTCTGCGTAGGATGTCTTGCGTTGTGGTGGCCCAAAATCCTAAGTTTGAAAGGGGATATCAGTATTTCTGTGTCTTAAAAGGGGCTCCAGAGACATTGAAAGAAATGTTCAACAAAATCCCAGATAATTATGATGAGCTTTTTAATTCCTATTCTGCACAGGGTTTCAGAGTCATCGCGACTGGCTACAAGCAATTGGATTCTAATACTCAACAAatccaaaatattaaaagagaaCAAGTTGAAAGcgatttaattttctctggatttttattgtcacaatcaaaaattaaagatgaTTCACTTGTAACTATATCATGTATTCATAAAATGCATATTAagaCTATAATGATATCTGGAGATAACCCGTTCACTGCGTGCCATGTCAGCAAGGAAATTggaatttcaaatttaccTGTGTTAATTCTATCAAAAATGAGTGATCAAGTCTCAGAAAAATACTATTGGAAAGGAAATGGCTTCAAATTTGAAGAAAACTTGTCTATTGCAAATATGGGATCTTTAGTCAAACGATTTCAATTTTGTATTACAGGAGATggactaaaatatttgatggaAACTAGTTTGAATTCATCTATTTTGATGCAATTGTTGCCGTATATTCGAGTTTTTGCCCGATTTGATCCCCaccaaaaagaatttattattaaactCTATCAAACCGAAGGCTACGTTGTTCTCATGTGTGGGGATGGTGCTAATGATATTGGTGCTCTTAGAATGTCTGATATTGGCGTAGCTATGATAAATACACCTATCGTTCATAAGGAAGAATCTAAACCTGAAAAAGAGACAACAAATAAGGTGGTCAggttaagaaaaaataagattaagCCCAAACAAGTTGAAAAGCTTTTTACCGTAAAAAAGCCTCCAGAACAGGAGGAATTTCGCCCAGGAGATGCTTCCATTGCAGCTCCATTCACCTTTAAGGGCCCTGAGGTTAGTCGGTGTCTAGATTTCcttaaaaattgttcatgCGCTCTTGCATATTTTCAACATATTGTGATTATTTCAACCATTTATTCGATTACATATGTTTATATGCTGTCTACGCACTATTCTGCTGGCTTAGTTTTTTCTGatagtcAGCAATCTCTTTATGGTGTTTTCAGCATGATTATTTATTACGGCACTTTCAATGTTGCACCATTTGAACTTTTTCCTAAAAGTAAACcgattaaaaatctttttcatCCGTATATAACTGTGACTATTGCTGTTCAGTCTTTTTTACACATCTATACTAtctattatttatcaaaCGTTATCAATATTGAGTTTCCGGTGCCTGATCCCCTTAATGAGATACAATTGGGAGCAAAATTTGAGCCGAGCGAATACAATACCATACTATATTATTATGAGTTTTTTGTCATGATATCAATCAACGTCGTTAATTATTGcGGATCTCCATTCAGCACCCCCatgattaaaaacaaaatattcatttattccatcataatatcatattttttactttttggAATGTTATCCAATAATATTCCATATTTatctcaatatttaaaattagtttctCTTTCAAATGAGATTctgcaaattttattttcggTCATTATCGTCAATTTTATATCTGTTTTTGCTATTGATCgtcttttttatttcttacttgttaaaaaaatcgaaatcaGCAACGCTTAAACTGCAATAGTTTTATGATGAgtctattatatttttatcattgttcttttcgttattttttagttttaa

Protein

Uniprot

Uniprot term	Description
Q9HD20	Endoplasmic reticulum transmembrane helix translocase OS=Homo sapiens OX=9606 GN=ATP13A1 PE=1 SV=2
Q9EPE9	Endoplasmic reticulum transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atp13a1 PE=1 SV=2
P90747	Probable manganese-transporting ATPase catp-8 OS=Caenorhabditis elegans OX=6239 GN=catp-8 PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13246	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR006544	Family	P-type ATPase, subfamily V	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR044492	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45630	CATION-TRANSPORTING ATPASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140358	Molecular Function	P-type transmembrane transporter activity	Interproscan