Detailed information of KAJ7315666.1 in Desmophyllum pertusum

Genomic Location: MU827871.1:6502...12799
NR annotation: KAJ7315666.1, Exosome RNA helicase MTR4 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CZU3Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1
P42285Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3
O14232ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mtr4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001225 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08148
all species →
DSHCTDSHCT (NUC185) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042533
all species →
Homologous_superfamilyNucleoporin, Nup155-like, C-terminal, subdomain 1Interproscan
IPR012961
all species →
DomainATP-dependent RNA helicase Ski2/MTR4, C-terminalInterproscan
IPR004870
all species →
FamilyNucleoporin, Nup155-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10350
all species →
NUCLEAR PORE COMPLEX PROTEIN NUP155Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000972
all species →
Biological Processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0005643
all species →
Cellular Componentnuclear poreInterproscan
GO:0006405
all species →
Biological ProcessRNA export from nucleusInterproscan
GO:0006606
all species →
Biological Processprotein import into nucleusInterproscan
GO:0006913
all species →
Biological Processnucleocytoplasmic transportInterproscan
GO:0017056
all species →
Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0036228
all species →
Biological Processprotein localization to nuclear inner membraneInterproscan
GO:0044611
all species →
Cellular Componentnuclear pore inner ringInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7315666.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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