Gene detail

Detailed information of KAJ7319204.1 in Desmophyllum pertusum

Genomic Location: MU827837.1:174592...194348
NR annotation: KAJ7319204.1, hypothetical protein OS493_036367 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAJ7319204.1

ATGGACGATTCTATCGTGACGCTAGCGGCTTCTCTTGTGAGAGAATACCTCAGCCGAAAGGGATTAAAGAGCACTTTACAGGCCCTTGATAAAGAGATGCCAAGGACTGAAGATAGCATAAGTAACCGTGGCCAACTTGCCAAAGAAATGCACATTGAAAAGCATATGAAGAAGAATAAGGAGCTACCCGAACCATTTCGCACAATGTTGGAAGTCATGGTTAAGTTTATTAAAGAACAAGGTGGCCTCAGTTCCTCGTCATCTGTGGGAACAGACAGGACAAATCAAAGGCCCAGCTCATCAAGGGAAACCAGAAAGGAAACCAGAAGTAAAACAACTGCACAACCAACAAACAGTGATCTCATCAATCAGCCTGACAAACGAAACGACACAGATGATAGAAAAGATTACGATGATCTCTTAAAACGCCTTGAAAAACCCGCAAAGAATGTTCCAAGTACTAAACCAAGCTTGTTTGGGAATGATTTAAGGACAAAAGCCAGTGCGAGTGAATCTTATAAGGGAAATATACATGCCACACCAGTTTATACATCAGATACTGGGGGTTTCATAGAATCCTTAACTGCAACAACACCTACGTCGTCGAGTGATCCAATGGCAAAACTAAAGAGTAAAAGAAGACTTAACAATATTGGCGGGCCTGTTGTTAGTTCTGGTCTGGCTGGTAAAAGAGACGCAAGGTCTCGTCATAGTACTGGGAGACTAGTAAGCAACAGCTTGCCGACTAAAAATATTGGAAGTCTATTTGGAGATGAAGATGAAAGTAAGGAAATGAGTATTACACAGTCTCAAAAGCTGGATGCACGAGATGATTATATTGATTTACCTCATAATAATACACGCAATGTTTCTTTTGAACAAATTGGGAAAGATCGGCACCAACTGGCAGAAGTTTCTCCCAAGCAGTCAAGAAAAAGTACATCTCACAAAACCTCAACAAGAAACCAGCCTGTCTCCAATTCCAGGTCTCAAAAGGCTAGAAGTAGTGATCTGGTGTTTGAAGATGTTGATGAGGATTTTGATCAAGAACTTGGACAGTTGTCATTGGGTCCTAAGAAAATTGCCTCGGTTGATGTTCAGAGTAAACCCATATCACTGGAAATTGCGATGGGCTTGAAAAACCTTATCTTTGGAACAGCTACAACAAGCTTTACACCAGAATGGAGGAACCAGAGTTTTTCGTTCTGTGACCTGTATCAGTTGGAATATGGAATTGTACAACTGAAGGGTGGACCTTGTGGTGTGCTTGCAGCTGTTCAAGGGTTTGTCCTCAAACATTTGCTGTTTGGTGGTAAGAAAGGAGATACAAAAAAAAAGCTCCAGCCGTCGTCACGAGAAAGAACAAACGCTGTTACATCTGCTATCAGTGAAATACTCTGGAGGGCTGGGGACAACAGAGATGCCACAGTCGCTTTACCTACAGGCGGTTCTAATTTTTTTGGTGCTGGAAGATATAAGCCTGACCAGTTGACAGAGGCGCTTGTTTTGTATACTTTCAAGTCTTCAGAAAGTCTTCACAGTTTTCTCTCTCAAAATATCACTCAGTTTGAGTCCGACAAAAGCAGTGGGTGCATTTTGCTGTTGTATTCCGTGATATTGTCGAGGTCAATTCAAACAGTAATATCAGATATGGATGAGCCAACTAACACACTGATGGGAGCCCATGGCTACTGCACACAGGAAATGGTCAATTTAATAATCACTGGAAAGGCGGTCTCCAATACGTTTGACAATATAATTGAAATAGATACAGGAGGAGAGAAAAAGAATGTCTTTAAAGGGCTAGAGAAACAAAGTGATATTGGGCTCATGTCGTTATTTGAACACTACAAGTCTTGTGAGGTTGGTGTGAACTTCAAGACCCCCAAGTATCCTATCTGGGTCATCTGTAGTGAAAGCCACTTCAGTGTCTTGTTTTCTGTTGACAGAAATCTCTTAGATGATTGGAAGCTAGAAAAGAAGTTTGATCTTTATTACTATGATGGCCTGGCCCGGCAGGACGAGGAGTTCAGATTAACAGTAGATACAACAAGAGAGTGTCCGGATTACAAAGACACCGATCTTGTCCCTCCATTGGAACATTGTATTCGAACAAGATGGAAAAACGCCGTCGTAGACTGGAATGGATCAGAACCAATCTTGTGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q3UQI9	Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 OS=Mus musculus OX=10090 GN=Mindy4 PE=1 SV=1
Q0VA42	Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 OS=Xenopus tropicalis OX=8364 GN=mindy4 PE=2 SV=1
A1A4L4	Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 OS=Bos taurus OX=9913 GN=MINDY4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13898	MINDY-3_4_CD	Deubiquitinating enzyme MINDY-3/4, conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025257	Domain	Deubiquitinating enzyme MINDY-3/4, conserved domain	Interproscan
IPR039785	Family	Deubiquitinating enzyme MINDY-3/4	Interproscan
IPR006594	Conserved_site	LIS1 homology motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12473	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0071108	Biological Process	protein K48-linked deubiquitination	Interproscan
GO:1990380	Molecular Function	K48-linked deubiquitinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22647	MINDY3_4; ubiquitin carboxyl-terminal hydrolase MINDY-3/4	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala