Detailed information of KAJ7319213.1 in Desmophyllum pertusum

Genomic Location: MU827837.1:249753...250532
NR annotation: KAJ7319213.1, high mobility group protein [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZKF4High mobility group protein 20A OS=Gallus gallus OX=9031 GN=HMG20A PE=2 SV=1
Q9DC33High mobility group protein 20A OS=Mus musculus OX=10090 GN=Hmg20a PE=1 SV=1
Q9NP66High mobility group protein 20A OS=Homo sapiens OX=9606 GN=HMG20A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009120 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR051762
all species →
FamilyUpstream Binding Factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46318
all species →
UPSTREAM BINDING TRANSCRIPTION FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for KAJ7319213.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7319213.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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