Detailed information of KAJ7323441.1 in Desmophyllum pertusum

Genomic Location: MU827814.1:358796...363137
NR annotation: KAJ7323441.1, RING finger and WD repeat domain-containing protein 2 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NHY2E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1
Q9R1A8E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2
Q9T014Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006674 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042755
all species →
FamilyE3 ubiquitin-protein ligase COP1Interproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44080
all species →
E3 UBIQUITIN-PROTEIN LIGASE COP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0043161
all species →
Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7323441.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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