Gene detail

Detailed information of KAJ7326522.1 in Desmophyllum pertusum

Genomic Location: MU827802.1:194571...197612
NR annotation: KAJ7326522.1, Stonin 2 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7326522.1

ATGGTGGATACGACTGGGGCTCCGCCTGCATCTGTAAACTGCGGTAAATGGGAGAATTTCGAGGAGGAGAATGGAGAAATTAACACTCATTGTCACGAGATTTCCGTTCCAAAATTGTCTTTGGTGCAAAACCACCTTTCTGAAAACTGTGAATTAATTAGCGATCCTAAAGCTCTGAGAAAACAAGGCAATTCTTCACTAATACAAGAGAGAATGGACACACAGACTGATGAGTCTAGGGAGAATTTAGAGGAGGAATCCAAACATTCGGAGATAGCACCGTCCAAGATAAACACTTCACAGCAATTTGATCCTGTGGAAGCTCGCGCTGATTCTTTGAATCGTTTGGAAACGACCACTGATCATGCTCAAGATAACGCGTTGGGCGTTCGTGAATCTCCTTCAAAATCGACTGCAGATGAAGTGACAGCCGAGGAAAATTTTAATCAATCGGTGAGTCAAGCAGATGGTGTTGGGAACGAATTGAACGGCGAGAGTGATTATTCAGGTTCAACAGCTGTTCCTGAAGCGCTGGTTGGAGGAAAAAATATTCCTTCAGCAGAATGGACGACATTCGAGGATAGTCTTAACAAAGATTCATCGACAGATGAGGCTAGTAGCACGACTGAAGATTTATCATCGACCGCCACAGAGCAGACTATACACATCGAAAACACACCCACGGCAAATCTGAACATGGCGGCTTTTGATTCCCAAGCCACACTGACCACAAACATTATCTCCAATTTGTGTACTGTAACTGAACCTGAAGATGTTCAGGTAAATTCTGTATCTTTTAATCAAGGAAAAAGCGGTACACACGCGCAATCGAATTCGCTCCCTGCGAGCAATACTATGAAATCAGCTGTTCCCTTTGTCAACCGAGCTACAACACTCGACAAAAACGCCGTTCGTTCGACTTCAAGCAATTCGCAGAAGCCGCAATTTCGTGATATCTCCGCTACGAAGCAAAGCAAAGATGAACTTGGAACGAACTGGGTCAGTTTTGGTGAAGAAGGGAATTCGAACGAAAGCCAACAAAAAGCGGATTCGAATATTGGTAACTTAGAAACGAACAAGCGTCTTGTTGGAAGCGATCTTCAAAAGCCGGACTTAGCGGTCAATAACACGAAACAGAGCACAATCGCTACCGGTTTACAAGCAGAAAAGAAGGTGAATGGAAACGAAACTACCTCCGTTGTGCCTCCTGTATCGTTCACTTCGGCTGAATTGGATTTGCTTGCGAGCAAGTCTTGGATTCAATTCGATGATTCTAAGCACGTGCAGCAAACAAGCGCTGCTACCACTTCAGCTCATCAATCGTGGGTTACGTTTGGTGATTCTAGCGCCCCAGTGGGACAGAATTTGGATTTGTTAGAATTGGATGTTAGTAATAAAAGTAAGTCCAGTATTGTAACACCAAGCCCAAATCCATTCTTGACTGCAACACCTTCATCTGGAAGTAATCCCTTCAAGCCACCTGCTGTGCCAAGCCCTACAAATCCATTCCAAGCTGATGCCACTGCAGTAAGTCCATACCCAGCATTGAATCAAGGTCCTGTCTCATCGTCAACGCCTCTTACTGGCGCAAAAACGTTGTTGGTTTCAGAGAGCAGTTTACAAGATGCATCTGCTCAACTGACTATTACACATCTAGGACTCCATGTCGAGAATTCAACATCAGTAGTCAAACCCGAGCTGGCCGTCGCTCAAGATCAAGTTGATGCAAGACCTGTAGGAACATTTAGCCAGGACCAGCAACCTGCCCAAGTAAACGAAGAACCACTTCTTGAGGAAAAGTCATTGATAACGAGTGGATCTTGGTCCATGCTTCTACGCTTCCCCGACAAGAAGCGCAAAATGGGCTCTCGTGCGTGGAAGCCTGTGGTTTTAAAGCTGGAGGGTACAACCGTGCAGATTTTTGAGGAGTATGAATTATCTGCACCCTTTAGAGAGATCCCATTGCAAGCTTATTTTGTGTTCACGACACCAAAGTTGCAGTCATTTGAGCATGGAGCAAAGGTGCATACTGTTAAGTTAGAGTACGTCAAGTATACAGAAGGGAGAAGTTTGCGGCATCGTGGCACCAGGGAGCACACAGCAGTAGGGACTCCTATCATTAAAATCGCATCTCCAAGTCACATAGCTATCAGAGAACTTTTAGAATCTTTCAACAACTCACTTCGCCTTCTTCCATCGTACAGAGATAGAGGCATCACTTACCGTCATGATGAAGTCTTTGTTGATGTTGATGATGTGACCAATGTTCTTTTATCTGGTGATGGTACCGTTCTAAGGAAAAATTCAAATGTGTTAATCAGGTTTCGAGCGTTTCTTACTGGTGATCCAGAATGTCAGTTGGTAATCAATGATATTGTTCTCAGGGAGAGAGAAGAGGCCCGTTTGCGAGGAGAGGAGAAACCCCAGCGGGTTCATCACTGGCTCAAACTGCGTCGTTGTGATTTCCATAAATGCGTCAATGCCACAACCTTTGACCAGTCACACGCTATAACTTTCCATCCTCTTGACGCATGTACATTTGAGCTGATGCGTTTTCCAGTGGAGCATCACAAACCTCTACCTCTCCTGATTAAAACTGTATTGAAAGTACATAGCGAGCAAAGAATTGAACTCAAAGCTGAAATCCAAGTTTGTCAGGAAACAAAGATGGCGAAGTACATCAGAAACAATGTGACTTTCAGATTTCCTATCCCAGAGTCTTGGGTGCCGCTCTTTAGAACAACGAAAACCTTCAGGGGGGAGAAGTCCATTAAATCCAGCAAGGGCCGGCGAGCTGCGGCAATTAAAAGCAGGCTAAGGAATTCGAAGTGTTCCATTGCTGTATCTCTTGGCCAAGCAAAGTACGAGCCTGAGTATGGTGCGATTGTATGGCGCATCGATGAATTGCCATTCATCCACAGCAAAATCCCAGCTGATGCACCTCAAACCCTCACATGCGTCTTAGACCTCCCCCTGGGATGGAGTATCCAGAAAACTACAAACCCACCGCAGAGCTTGAGTATGATGTGGCGTACGTGTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CDJ8	Stonin-1 OS=Mus musculus OX=10090 GN=Ston1 PE=1 SV=2
Q9Y6Q2	Stonin-1 OS=Homo sapiens OX=9606 GN=STON1 PE=1 SV=2
P54672	AP-2 complex subunit mu OS=Dictyostelium discoideum OX=44689 GN=apm2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007811 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00928 all species →	Adap_comp_sub	Adaptor complexes medium subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050431 all species →	Family	Adaptor complexes medium subunit	Interproscan
IPR028565 all species →	Domain	Mu homology domain	Interproscan
IPR001392 all species →	Family	Clathrin adaptor, mu subunit	Interproscan
IPR012320 all species →	Domain	Stonin homology	Interproscan
IPR036168 all species →	Homologous_superfamily	AP-2 complex subunit mu, C-terminal superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10529 all species →	AP COMPLEX SUBUNIT MU	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030136 all species →	Cellular Component	clathrin-coated vesicle	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0035615 all species →	Molecular Function	clathrin adaptor activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0030131 all species →	Cellular Component	clathrin adaptor complex	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7326522.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.