Detailed information of KAJ7328641.1 in Desmophyllum pertusum

Genomic Location: MU827795.1:639449...642425
NR annotation: KAJ7328641.1, TATA box-binding protein-associated factor RNA polymerase I subunit C [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005742 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20641
all species →
TAF1C_beta-propTAF1C, beta-propellerRepeatInterproscan
PF20642
all species →
TAF1C_HBTAF1C, helical bundle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038801
all species →
FamilyTATA box-binding protein-associated factor RNA polymerase I subunit CInterproscan
IPR049087
all species →
DomainTAF1C, beta-propeller domainInterproscan
IPR049090
all species →
DomainTAF1C, helical bundle domainInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15319
all species →
TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001164
all species →
Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001650
all species →
Cellular Componentfibrillar centerInterproscan
GO:0006360
all species →
Biological Processtranscription by RNA polymerase IInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7328641.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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