Detailed information of KAJ7330686.1 in Desmophyllum pertusum

Genomic Location: MU827792.1:1514395...1515869
NR annotation: KAJ7330686.1, hypothetical protein OS493_022302 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P0F4RNA-binding protein 7 OS=Danio rerio OX=7955 GN=rbm7 PE=2 SV=1
P57052Splicing regulator RBM11 OS=Homo sapiens OX=9606 GN=RBM11 PE=1 SV=1
Q80YT9Splicing regulator RBM11 OS=Mus musculus OX=10090 GN=Rbm11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008825 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR052285
all species →
FamilyNuclear exosome targeting complex subunitInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13798
all species →
RNA BINDING MOTIF RBM PROTEIN -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000381
all species →
Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003727
all species →
Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7330686.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP