Detailed information of KAJ7334483.1 in Desmophyllum pertusum

Genomic Location: MU827784.1:1616397...1617175
NR annotation: KAJ7334483.1, LIM/homeobox protein Lhx8 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50458LIM/homeobox protein Lhx2 OS=Homo sapiens OX=9606 GN=LHX2 PE=1 SV=2
Q9Z0S2LIM/homeobox protein Lhx2 OS=Mus musculus OX=10090 GN=Lhx2 PE=1 SV=1
P36198LIM/homeobox protein Lhx2 OS=Rattus norvegicus OX=10116 GN=Lhx2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000793 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412
all species →
LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781
all species →
DomainZinc finger, LIM-typeInterproscan
IPR050453
all species →
FamilyLIM/homeobox transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24208
all species →
LIM/HOMEOBOX PROTEIN LHXInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182
all species →
Biological Processneuron differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7334483.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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