Gene detail

Detailed information of KAJ7336037.1 in Desmophyllum pertusum

Genomic Location: MU827783.1:2000202...2009759
NR annotation: KAJ7336037.1, hypothetical protein OS493_013412 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7336037.1

ATGGCAACGACGATTTTCAAACTTCTGCTCTTAGCTTTTATCGGTCGAGAATATGTCTATGGCTCACTTCGATCGATCGGGCTGGGACAGAGATACCCAAACGCCGATGAGATCGATACATGTGGAAATATCAGGGACGTTATCAGAAGAAATTCAGCTCGCTACAGAAAGATCCTTGTGAGAAATACGAACTCCGAAATAGCGTTTGCCAATGACGATTGCCGACGAATGAGTGCAAGAGCAAAGAGCAAGCTTGATGTGTTGGGCTCTAGAGTTAGACAACAATGGAGTAACATAAAATTGAAGGTGACGCTCGCTTGGACAGATCAAATCATGCCACAAGCACCAATTTCACTTCATTATGAAGGACGCGCTCTTCGTCTCCAGACCTCTGATGGCGACAGACAAAAGCTCTCTACTTTAGCAGGCCTGGCTGTAGAGGCAGGATTTGACTGGGTTCACTATGCAACCAGTTCATATATCCATGCGAGCGTCATTCGAGATGTTTGCCAGACATCAGTTGATTTAGCATTTATCCTGGACAGTTCAGGCAGTGTTGGAAGCTACAATTTTAAGAAAGTAAAGATTTTTGTCAAGAACATTGTGGACTTCTTTAACATTGGTTCATCCGGGACACACGTGGCTGTTGTGACGTATTCCACATATACGAAGCTGGAGTTTAATTTGAAAGCGTATTACACCAAGACATCGATTAAGAATGCAGTGGGAAATATCAAGTACCGAGCGGGGTGGACTTACACCGCTGACGCATTGGATTTTGTGCGCACGAACATTTTCACCACATCACAAGGCATGCGTCCGGATCAAGGGATTCCTAAGGTGACCGTGTTGCTCACTGACGGTTACTCAAATGGTCGCGGTGTATCCGGTCCCGCCAAACAACTCCGTAAGTTAGGCGTGAACATCTTCTCCATTGGTGTGGGACATTACGTCAACCCAGCAGAGCTGAATGACATAGCCTCTGATCCTGATAGCACGCACGTGTTCCGAATGAACAGTTTTAACGACTTGAATGGATGGGTGGACAAACTCAGTGCTGTGTCGTGCGATGAGGGTGCTTCCATCTCCTCCTGCGATGACACAATCACCACTGTGGAGAGTGACACGTTTAAATATTTCAGGACTCAGTTTAGTACCGTGGCGAATAACAGAATATCAGTGGAAGTGAGAGACATTGAAGGAATCTCGCATCTCTATGCATCGCTAACTAGCACCAACCCAGGCCCCATGGATCCTGCCTCGGCCAAGAATGAAAGCAATATCTCTCCTCGGGCCATTTCTCTTTCGCTGTCGGCAGCAAACACGATTGTGTATGTAGCTGTTCAAGGTCAAGAACAAAGCAATAAATTCAAGCTATCCATGTGGGATGCTCTCTTTTCTCAAGACACGTACGTGACCAGTGTCAAGGAAGAACAGTCTGCACCTGTCACGGTGCTAGATAAAACACTCACGCCGTACAATTACAAGCTCAAGTACAGCATTGTTGAGGGGGACGATGACAACTGCTTCAAAATCAACAAAGACACAGGAGTTATCACAACAACAAAGAAGTTAGACCGCGAGGCACGTGCATCATATCGCCTGACTGTTCTCGGTCAGAACGCTCAAAACAGTTGTCACAAAGGTCGCGCTGTTGTTCTAGTTGATGTAGAGGACATTAATGACAATTCACCCGTCTTCGGACAATCTTCGTATTCTGCAACTCTACCGGAAGGAAAGCCCGCCAATACGTTTGTTGCCATGGTTACTGCCACTGATAAAGATACTGGAACGAACGCGCAACTGTCTTACAACATTACGTCAGGAAATGAAGATAACAAATTCTCGATTGACAACAACGGCGAAGTCAGAACCACTAAGGTGTTAAACTATGAAGACATAAGTAACAGCTATAGTCTGAAGATTACCGTTAAAGATGGCGCACAACCCAGTTTGAGCGACACTGCAACACTTACAGTTATTGTACAAGACGTCAACGAACCTCCGTACTTTGTAAATAACTGTGCACATAATAACACTTGTAAATTCTCGGTGAAGGAAAATAACAACCGTAACGCCCGCCTGGGTATGATACAAGCCAGAGATCCCGACACGAGCTGCAACACTTTAACTTACAAAATCACCACACAACAGTCACAGAATAATCAAATTTTCGCCATTAGCAACAGCGGGCAAATAACAGTGCTTTCAAAACTGGATCGTGAGTTCAAGTCTCATTACACGGCGGTGGTCACTGCGCAAGACTGTGGCTCGCCTTCTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P32018	Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL14A1 PE=1 SV=2
Q05707	Collagen alpha-1(XIV) chain OS=Homo sapiens OX=9606 GN=COL14A1 PE=1 SV=3
Q80X19	Collagen alpha-1(XIV) chain OS=Mus musculus OX=10090 GN=Col14a1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000235 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF01085 all species →	HH_signal	Hedgehog amino-terminal signalling domain	Domain	Interproscan
PF00028 all species →	Cadherin	Cadherin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126 all species →	Domain	Cadherin-like	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR015919 all species →	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR001657 all species →	Family	Hedgehog protein	Interproscan
IPR009045 all species →	Homologous_superfamily	Hedgehog signalling/DD-peptidase zinc-binding domain superfamily	Interproscan
IPR000320 all species →	Domain	Hedgehog, N-terminal signalling domain	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR050971 all species →	Family	Cadherin domain-containing protein	Interproscan
IPR020894 all species →	Conserved_site	Cadherin conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24025 all species →	DESMOGLEIN FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0007267 all species →	Biological Process	cell-cell signaling	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0005911 all species →	Cellular Component	cell-cell junction	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7336037.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.