Gene detail

Detailed information of KAJ7336591.1 in Desmophyllum pertusum

Genomic Location: MU827782.1:1881758...1894482
NR annotation: KAJ7336591.1, Fibroblast growth factor receptor 4 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7336591.1

ATGGAGGCGTTTAAGAAGCCGTTAGCGATGCTTCTTCTCATAATTGTATTCTCTTCGATAGCACATTCAGATCACGATCGACCGACGTTCAGAAATCCATCCAAAAACCGCGATCGTTTTCTGGAATACATTGAAGGTGTTCAGGTCAAGCTCAGGTGCCATGCAAAGGGAGTGCATCCACTCAATGTGACGTGGCTGAAGAACGGCAAGCCGTTGATTCGAGCTGGCCAGACGCTCTTGAAATCCAAAGGCTGGGTTTTAAATTTCGCCACATTATCTTATAACGATGCTGGCACCTACACTTGCACAGTGAGGAATGCATTTGGTATCATCAAGCGGACGTTTATTATCAAAGTTGTTGTTGATCCTCCTCAACCGCATCCTCAGGAACGCAAACCTATGATTTTGGAGAACGTTTTAAAGAACAAAACGGCCATAACTGGCGAAGACGTCACGTTTGTGTGCTCGGCCGTTAGCAAAAGTCATCCAGAGTTTCACTTTCTCAAGTGGAAATCACTCAAAAATGTTTCAAATGGCTCTGATCCTTTCGAGTTTGTTGACTTTACCAAATCCAAGTTCCGTGAGATTCGTAAGATTGACAAGCAGCACATGGGCAACCGTCAAGTCTACACACATCGACTCATTGTGAGAAACGTCACGTTGGCGGATGCGACCAAGTACACATGCGTGGTGGGGAGTTCCGCTGGTTATGTATCCAAGCACGCGTATCTTATCGTCCTGAGCCGGGAAGACAAATATCCACCGCGCATTCGAGGTACTCCAAAACTTCAGTATAACGCTGATGTAGGAGAACTCAAAAGATTACGATGTGGAGTGACGGGACTTCCACCACCGACCATTACATGGATCAAGGATGATAAGCCTTTACAGTTGACAGAAAGAGTAAGGAATTTGAACAACAACAACAAAACTATAAAGATCAAACAAGTCAGACTTGGTGACCAAGGAAACTACACCTGCATTTCTGAAAATCCTCACGGGAAACTTAGTTTGACTCTAGAACTCAATGTCCGTCAAGGAGCGCCAACCTTTTCTGATCCAAGTATAAAAAGAGCATTTAGAGCATGGCCATCATCACACTCGATCAGACTGGAGTGTTTAGCAACTGGAGCACCACCTCTCAAATACACATGGCTAAAAGACGGAAAGAAAATGCCAAGACGATGGATGGACCCATATCTTAACAGTTCAATATGGTATCTAAAACTGAAAGATCTGGTGCTCAACGATACTGGGAAATACACTTGCATAGTGTCCAATCCATATGGCAGTATAAATCACACTTACACGCTTCTGGTTGTTGCTAAAAAACCACTATCGCCGCCCATCCTACAAAATGACCTTCCAAAGAACACAACCGTGCAGCTTGGGGATAATGCAACAATGACATGCATTGTGCTTGTTAGTGGAACACTTCCTGACTTTAAATGGCTGAAGTGGGACAAATCCATCACATCGATCCAGAAAATTGGTGACGATTTGGACAAGGAATCATACCACCTTATAGACCCACATAATTACAACACTATCCAAGTTAAAGACAGTTATGGCGTTGAGTTGAGAATTACCAATGTGACAGAGGACGATCTTGGACTCTACACTTGCGTTGTGAGTAATCATGTCGGCAAGAATTACAACAGTGCATTCCTCAGCACATATGTGAAACCCACGATTCCTGTTAGAGGAGGGCCAACCTTTTCTGATCCAAGTATGCTAAAAAGAGCATTTAGAGCATGGCCAGCATTACACTCGATCAGACTGAAGTGTTTAGCCACTGGAGCACCACCTCTCAAATACACATGGCTAAAAGACGGAAAGAAAATGCCAAGACGATGGATGGACCCATATCTTAACAGCTCAATTTGGTATCTAAAACTGAAAGATCTGGTGCCCTATGATTCTGGGAAATACACTTGTATAGTGTCCAATCCATATGGCAGTATAAATCATACTTACACGCTTCAGGTTGTTGCTAAACAACGATCACGTCCCATCCTACAAAATGACCTTCCAAAGAACACAACCGTGCAGCTTGGGGATAATGCAACAATGACGTGCATTGTGCTTGTTAGTGGAACACTTCCTGACTTTAAATGGCTGAAGTGGGACAAATCCATCACGTCACTGTCAAACATTGGTGACGATTTGGAGAAGGGATCATACCACCTTATAGACCCACATAATTACAACACTATCCAAGTTAAAGACAGTTATGGCGTTGAGTTGAGAATTCCCAATGTGACAGAGGACGATCTTGGACTCTACACTTGCTTTGTGAGCAATCATATTGGCAAGGATTACAACAGTGCATTCCTCGGCAAAGGTGTGAAACCCACTGTTAGAGTGACAGCACCAACACTTGGAATACCAGCTATGAAGACAGCTTCAGCTGAAGGATTTCGTGCGGCAAGAAAAGAACCTCAGCCAAAACCTGGTCGCAACGTGAACCGTGTGATGCTTTTTGTGACGATACCGTTATGTGGAGCTGTTATTATAACAGCGTTCCTCGCGTGGTATTACTGGCAGATACGAAAAATCAAGAAGAGTGCATCACCCAGAGCTTTAGCGATGGACACGATTGAACAATCAGGACATGCAAGAAAAAAACCACGCAACGAGTATGTCTTCCTCCCCCAGTACTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3YXG0	Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
A2AJ76	Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000215 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00047 all species →	ig	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR052615 all species →	Family	Fibroblast growth factor receptor-like	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR013151 all species →	Domain	Immunoglobulin	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19890 all species →	FIBROBLAST GROWTH FACTOR RECEPTOR	Interproscan

Gene Ontology

No Gene Ontology signature was detected for KAJ7336591.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26107	FGFRL1, FGFR5; fibroblast growth factor receptor-like 1	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.