Gene detail

Detailed information of KAJ7339483.1 in Desmophyllum pertusum

Genomic Location: MU827779.1:2084943...2099547
NR annotation: KAJ7339483.1, potassium channel, sub T, member 2 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7339483.1

ATGCCTTTTAAAAAGGGGGATTTAAACAATCCCTCCTTCAAACAAAAGCGCAGGTCAACTAAAATTAGCCCTACAAGTAGTAGAGAAAACAGAGGAAAGCCATTCTCTCCAAGACTGCGAGCGGCCGTTTTACAGCGGATAAAATCAGGAATCGATGTCAACACTGCACTCGCGGACGCTTGTGTCCGAGACAAAAATGCCGCAAAACGCTGGAAAGATCTTTTACAAGACACAGGAAATGTTACTCCATTGAAAAGAAGCGGCGGAAGGCCAAGAAAAGTGGCAAAAGGTTCGCCGGAAGAAAAATTATTAGAGCGACTGGCCGACAAAGACCCTTACTGCAGCACCGAAATAATTGCGTGCCGGCTGCTAAACAGGACTGAAATAGAGATAAGTTCAAGAACTGTCCGCCGCCAACTCTACAAGCGAGCAGATGACAGGTTTAGCTACAAAACACCAAACACGTCCTCCAGTGAAGTTAACTTGGAGCGAGTTCTTGACATGCAGATGGGTTATCTTGATGGCATGCACAGTGCGATCGCTCAGGGCCTGTGTTCTGAAGATGAATTTTACTTCGCGGACGAGTGTCCCATTTTCATCGGTGTTCTGCCTAGAAAAGGCCGTTGTAGAAAAGGCGAACAGCTGTATGGAAGAGCCCCTTATCGGCCCAGAAAGTTCACGCTTCATTCCGCGATTGGTCCAAGAGGATATTACAAAGTTTGGTTGTCCGAAAATAATGCAAACGACGCGGAGGTCAGGCACTTTGTCCTCGACAACATCCGTTCGCCTCAGCATGCTCCTAGCCTTGGCGGTCCACCACTACCATTGACCATCCCACCACACAGTTTTTTCATCTGGGATCGCCTTGGCAGAGCAGGAAGATGTCTTAATCCTTCGAAGCAGCATTACAACCCTGAGATTCACCAACAGTTTCGCCAGGCTAAGATCCAAGTTGTGATGCTTCCACCGAAGGGCCACGAAGCAAATCCGTCCGAGCTGTTTCAAGGCAATATTCAAGCCAGTGTAAAGAGATGGAGAGCCCCTGGTCAAGCAGCCGACGAATCCGGTCCAAGAGACTTTTACGAAGCTCAGAAAGCTGTTTCAGATGCTCTCGACCGGCTGCGTTTCAGCTGCAAAGCCTTCCGTGGCTGGGTTGAGGATGCTGAGGGATGCTTTATACTCACTGACAGATATGCAGATAACAGGGAGGCGGCTGACAAGCACACCATTTTGAGAACATGGGCCATCCAGGACTTTGCTCCAGCCACACCTCTGTACGTACAGATCCTTAAGCCAGAGAACAAGTTCCATGTCAGTTTTGCAGAGCACGTAGTCTGTGAGGATGAAGTCAAACATGCACTCTTGGCTAGTAACTGTGTATGTCCTGGGATCTCAACCTTTTTCACTCTTCTTCTCCATACTCTTCATGAACAGAGTGGATCTGAGGATTGGCATGATATGTATGGCAAGTGTGCAGGAAATGAAATATATGACATCCGCTTGGGTGACAGTAAAATCTTCAGACCATATGCTTACAAGACGTTTACACATGCTGCTTTTCATGCACACAATAAATATGGGGTGACGCTCTTTGCAGTTCGTTCAATTGGGAAAGGTTCACGCATTTTATTAAACCCTGGTCTCTCGCATATAATGAATTATGAGGATCGTTGCTTCTACATTGCTATCTCAAGTGAAGAAGACACCGCATTCAAGGCTTACAAGGAGCCAAAAGAGTCAGTCAGCCTGTTTAAGGGCAGCTTTCGCCACAAGAACGATTCCTTCATCACTGCAAGCTCTGTAGCTCTTGAACTAAAAACGGATGCGGTCGAACCAGTGGGCCTAAAGTTCTTAGATGAGGCACCTGCAAATGGTGTTGGACATGCTAGCTCCAGTGATCAAGAGACTCCAGGCGATCATCAAACTCTGTGTATGTACCTGATGGATCAGATTTTGACGAAGAAGAAACTTCTGAGGCAGGATATGGATTTGCTTGACGACACAAGTAGAATTCCTAGTTACGTGGCAGGAGTTCCACCTTGCTCTTTGTATATTGGTCGTACACCTCTAAGATGCCACCTTCTGAAGAATCCAAAGAAATCTTGTTGTTTAGGACTTAGAAATGAGGCTTGCTTGGACAGAGATCTAAATGACAGTGCTAGATTACATCAGAGGCAGCATGGTGCTATCATTGTGGCATCTCCTGTAGCAGAAGCTGGATTATACAACTTCATTCTTCCTCTGAGAGCTTACCAGCGACCTAAGTGCACCCTTAAACCCATTGTGCTACTTCTCAAAGAAGAACCTAATGAAGATTTCTTAATGGCAGTTTGCCACTTTCCCATGCTGTATTACATGATTGGAACTATAAACAGTCTGGATGACCTTCTCAAAGCTGGTTGTCTTCATGCGGACAGCATAGTGGTGGTAGGCTATCGGTCTCATGGACAGATGTATGATGAGGAACACATGGCAGATGCCAGCACCATAGTAGATGTACAGAGTATTTACAGATGCTTTCCAAGAGCAACTCTGATTGTCGAGCTGACGCATGCCTCCAACATGCGCTTCATGAAGTTTAATGCCGATATGTCTCTTCCCCCTGGAATACAAAGTGAATCATTGGCCAGCTTTAAAACACGAAGCTTCAGAGAGAGCGTCAAGAGGCGAATCAAACAGCAGAACAGGGACCATCTCAACTACATGTTCCGTGAACCCTTTGCCGCTGGTCATGTGTTCAGTATGAGCATGCTGGATACTCTGCTCTATCAGGCATTTGTGAAGGATTACATGATCTACTTGGTTAGATTGCTGTTAGGCTGTGAACAGTCTCCAGGATCAGGATATCTCTCTGCACTGAAAATAACAGAGGATCACATTTGGATTGATACTTATGGAAGACTTTTCCAAAGACTTTGCTCCACCACTTGTGCAGTTCCTATTGGACTCTATCGATCAGAGGTTCCTGAGGATGACTTTACAGATGCATTTCCAAGGAGAAGAAAGAAAGAGATTCGTGAAATCTCAGATATTATAGAGAACAGGATGAAAAATCTGAGTATTTTTGGAACTCCTGACATGACCCAAAGACCAGGCAATTCCTATGTGATAGTTAACCCTAATCCTGAGTTTAAGTTACAAGAAGGAGATGTTATCTACCTGATTCGACCATGTAACACAAACATGTCAGATATAGAAGAGGAACCAACTGATCCAGATGGAGGTGATGACTTGCCCAATACGTCTCTGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8QFV0	Potassium channel subfamily T member 1 OS=Gallus gallus OX=9031 GN=KCNT1 PE=1 SV=1
Q5JUK3	Potassium channel subfamily T member 1 OS=Homo sapiens OX=9606 GN=KCNT1 PE=1 SV=2
Q9Z258	Potassium channel subfamily T member 1 OS=Rattus norvegicus OX=10116 GN=Kcnt1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002912 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03493 all species →	BK_channel_a	Calcium-activated BK potassium channel alpha subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047871 all species →	Family	Calcium-activated potassium channel slowpoke-like	Interproscan
IPR003929 all species →	Domain	Calcium-activated potassium channel BK, alpha subunit	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10027 all species →	CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005228 all species →	Molecular Function	intracellular sodium-activated potassium channel activity	Interproscan
GO:0005267 all species →	Molecular Function	potassium channel activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015271 all species →	Molecular Function	outward rectifier potassium channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7339483.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.