Detailed information of KAJ7350975.1 in Desmophyllum pertusum

Genomic Location: MU827372.1:16005...18258
NR annotation: KAJ7350975.1, E3 ubiquitin-protein ligase trim23 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BGX0E3 ubiquitin-protein ligase TRIM23 OS=Mus musculus OX=10090 GN=Trim23 PE=2 SV=1
P36407E3 ubiquitin-protein ligase TRIM23 OS=Rattus norvegicus OX=10116 GN=Trim23 PE=2 SV=2
P36406E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens OX=9606 GN=TRIM23 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006280 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445
all species →
zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00643
all species →
zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR052667
all species →
FamilyE3 ubiquitin-protein ligase RING-typeInterproscan
IPR027370
all species →
DomainZinc finger, RING-type, eukaryoticInterproscan
IPR000315
all species →
DomainB-box-type zinc fingerInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907
all species →
Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47156
all species →
PROTEIN CBG20824Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7350975.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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