Detailed information of KAJ7351820.1 in Desmophyllum pertusum

Genomic Location: MU827354.1:130720...133244
NR annotation: KAJ7351820.1, Glycoside hydrolase 2 (Mannanase, beta-galactosidase) [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14692Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens OX=9606 GN=BMS1 PE=1 SV=1
Q08965Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BMS1 PE=1 SV=1
O94653Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bms1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003869 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04950
all species →		RIBIOP_C40S ribosome biogenesis protein Tsr1 and BMS1 C-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039761
all species →		FamilyRibosome biogenesis protein Bms1/Tsr1Interproscan
IPR007034
all species →		DomainRibosome biogenesis protein BMS1/TSR1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12858
all species →		RIBOSOME BIOGENESIS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000479
all species →		Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0034511
all species →		Molecular FunctionU3 snoRNA bindingInterproscan
GO:0042254
all species →		Biological Processribosome biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7351820.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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