Detailed information of KAJ7356317.1 in Desmophyllum pertusum

Genomic Location: MU827322.1:386689...391048
NR annotation: KAJ7356317.1, snoRNP complex protein nop56 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9D6Z1Nucleolar protein 56 OS=Mus musculus OX=10090 GN=Nop56 PE=1 SV=2
O00567Nucleolar protein 56 OS=Homo sapiens OX=9606 GN=NOP56 PE=1 SV=4
Q5RA29Nucleolar protein 56 OS=Pongo abelii OX=9601 GN=NOP56 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002002 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01798
all species →
NopsnoRNA binding domain, fibrillarinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002687
all species →
DomainNop domainInterproscan
IPR042239
all species →
Homologous_superfamilyNop, C-terminal domainInterproscan
IPR036070
all species →
Homologous_superfamilyNop domain superfamilyInterproscan
IPR045056
all species →
FamilyNucleolar protein Nop56/Nop58Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10894
all species →
NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030515
all species →
Molecular FunctionsnoRNA bindingInterproscan
GO:0031428
all species →
Cellular Componentbox C/D methylation guide snoRNP complexInterproscan
GO:0032040
all species →
Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7356317.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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