Gene detail

Detailed information of KAJ7356322.1 in Desmophyllum pertusum

Genomic Location: MU827322.1:462661...465956
NR annotation: KAJ7356322.1, Ubiquitin domain-containing protein 2 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5EAE3	Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1
Q8WUN7	Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2
Q6PGH0	Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008889 (this species only) · gene tree & orthology
Ubiquitin family	ULD\|UBL\|NEDD8 · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_Other · all ubiquitin genes in this species
Ubiquitin family	ULD\|UFD/UBQ\|UBQ_PIM · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16455 all species →	UBD	Ubiquitin-binding domain	Domain	Interproscan
PF00240 all species →	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR038169 all species →	Homologous_superfamily	DC-UbP/UBTD2, N-terminal domain superfamily	Interproscan
IPR032752 all species →	Domain	DC-UbP/UBTD2, N-terminal domain	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR019956 all species →	Domain	Ubiquitin domain	Interproscan
IPR039869 all species →	Family	Ubiquitin domain-containing protein 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13609 all species →	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13993	HSP20; HSP20 family protein	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.