Gene detail

Detailed information of KAJ7357472.1 in Desmophyllum pertusum

Genomic Location: MU827321.1:715417...737001
NR annotation: KAJ7357472.1, WD repeat-containing protein 27 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7357472.1

ATGGCGGCAACTCATGATGGTTTGCTGCGAGTTTCTTCATCTCCGGGCCAGTTACAAATGACCTGCACAAGCGATTTCCTCGCATTGCCTTTAACAAAAACTATTGTAGGTGTTTGGTGGCTTGGAGACTTGTCGAGAAAGCCCTTGCAGTTATCTGGTCACAGCAGAATTATAAGTGCAACCTGTTTTGGACAAAAGGACAGACCCCTTCTTCTCTGCACAGCCTCAGAAGACTTTATTTATATCTGGAATATCAACAAGCTTTTGGCTATTGACAACTTAACTAGCGATCATAGCAGTGGCATACCTGTTGGGAAAGACCTGGGGCACATCCAGCACCTTAGCTTTAGCCTGACAGACAGGCTGATCACAGCGTGCATTGGAAAAGAAATATGGGTCCTGAATATCCAGACCAGTAAACTGGACACCCTGCTGGAAGGACACACCAGTCATGTGACATGTGCACAGTTTAGCCCCAACAATGGGTCCATCATTGTATCCACAAGTGAAGACAGAACTTTTAAGGTGTGGGATATTAAGCAGTCCTGTCTGTTGTACCAGTCAGCTATTTTGTCAGCCCATCCATTCCTATCACTGGCTATTGATCCTGTTCAAGACCAAATGGCTATCGGCTCTGCCGATGGGAAGGTTCACATGTATGACCTGACTTATGAAGGCGGTTACCGATGCCTATTTGAATTGGATGTCGGTCAACTGCTGCAGAAATACTGGAATTGGAGAGAAACATCCAAGGCTACGTCAAACAATGGGCCATCCTTCATTAGCAGCCAGCCATCTTGGCAAAAGGAGAGCATACCTGATGATGAAAAGGAATCTACACTGGAGCCAGGAACAGCAGTGCTTGCTGTCTGTTTCATTAGGAATCCACAACAGCCGAGTGCTGAAGAGAATGATGCAGCAGGCTTACACAGGGTCCTGTTTGGGTCGCAGAGTGGATCAGCTATAAAGGATGTATTTCATGTTCCGTCCATTGTCGCCATAGCAACAACAGCTGCTGTTCTTCTGTTAAACTGTAACAGTCGAGAGCCACTTTATATTCTGGATTTCCAAGAACCTGTTTTGTCCAGCAATGAGTTGGATGACGTACAATACAATATATCTACACCAGGGTCATTTGCCTTCGCTGAGAGACCAAACGGCAGTGTTACGTGTCTAATTGGCAGCTTGTTTCAAAATACTGTCAACGTTGTCAATCTGCGAATGCCGACAACTAACAAGGAAGGGGAGAATACATCAGAGGTCCTATCTCAGAGGTTCTCTCGGTCTGTAGGTCTGAGTTCCCATGGTAACCAGGATGAGGAGTTGTCAGCCATAAGAGGCGCAGAGATGGCAACAAACACCATAACTGTTCTCTCTAATTCTCCTCTCTGTAGTAACTCACCTTTAAAGGCAGAGCTTGTACTAAAAACAGCAACCAAACAACAACAGCAGAAAAAGGCATCGCATAAAGGCGTAAAAACAGGCGTTCGTGATCAGCCTCTCACATTCCACTCAAAAGTCAAATCATCAGGCTACTCCGCTGCGGCACCAAGGGCCAAAATGTTTTCACCAAACACGAGCGTTTCAAAGCCGAAAACTTCTACAGTTCCCTTGAAAAAGGCAACGTCCACAGGCTCAAGCTCCGGGGCTTCATTGAAGGAATACCCTATAGACAGTGAAGCACCAACTAACCTGCAGGATAAAATACCGCTCACTGAACAGCCCACCTCTATCAACAGCCTCGTGTTTGCAGTATTTGTGATTGTTTTTCATGGCTTTTTGTTTATCAACAGGGATGGAAAGCACATCGCTTGTGCCTTGGCTAACAAGAGCGCTCACATGCTGAGACCTCCACCTTCAAGCAAAGAGACAGTGTTTACTGGTCATGATGGATCAGTAACCAGCGTTAACTTCAGTCATGACAGCCGCTTGCTGTTGACGTCATCTTGTGACAGGACAGCGAGGCTGTGGAGCCCCGCCCACTCGGACCCTTTGATGACATTCTCATCTGTCAATCATAACTTTGCATCTGAACTTGATAGCTCTGCAAAGGTCAAGGAAAACCCTCCTTTTACCAAAGAAATAATCCAAGCAAGGTTTTATTATGTCGACAAGTTTGTCCTGCTAGCTTGTGGTAACGGTCTTCATATGTACAAGTATCACATTGACGTCGGCCACAAAGATGACGTCAAAAGATACCAGACGAACAACAAATACAAGTTGGTAAAAATATTTCACCAGGAGAGAGCTCAGCAAATCACCTGTTTTTCCGCCATCAACGGATTTCATTCTTACATCGTCCTGTCATGTGGCTCCAATAAATCCATCGAGGTGTTTGATATGAACGCGGCTCGTACAATCCGAGTGGTCCTGGACGCGCATACTCGGCCTGCGCACACGATATGTCAGAACGAGGCTCCATGTTCGTGTGTTCGACGGTATGATGGTCACGTGAACAGATCACAACCAGTTGGTCTCGCTATCAGTCCCTGCGCAAGATTCATTGCTACTGGGTCAGAGGACAGATCGGCGTACTTGTACGACATTCGAGGAAATACATTTTGCCATCGTTTAACTGGTCACACAGACGTCGTGTCGGACGTCGCCTTCCATCCTGCTCAGCCTCAGCTTGTTACTGCATCACTGGACGGCAGGTTACGGTTTTACTCTGATCAAGCCAAACAACTGATGATAACAGAACGCGCACACGGAGTGAAACGAAAGCTAACCGAAGTCGATGGCGATGGAGAAGGCGAAGCAGTTCATGGCCGTTGTCTTCAGCGTGAAACTGTGTTCAATATTTCGATCTGCAAACTGCAGAAAAGCTTTACACGGCCGGAGCCGGTTCTCTTTAGAACCGTGCTCATCTCTAATACGCTTCGTCTCATCGAAGAAGACATTAGAGAAGAGCGAAGGACTTTAGAAACCACTGTTTTGAGTGAACCTAGCGACGAGAAAACATTGGATAGAGTCGTAAACAGGAGCGAGCGAGTCACTCTCTCTGCTCATAATATTGGCACGCGATCACGCGAAGAAACTTCAAAAGTTCTCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2RRH5	WD repeat-containing protein 27 OS=Homo sapiens OX=9606 GN=WDR27 PE=1 SV=3
Q8C5V5	WD repeat-containing protein 27 OS=Mus musculus OX=10090 GN=Wdr27 PE=2 SV=2
Q2HJH6	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP40 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002285 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06031 all species →	SERTA	SERTA motif	Motif	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR009263 all species →	Domain	SERTA domain	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR042411 all species →	Family	WD repeat-containing protein 27	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44525 all species →	WD REPEAT-CONTAINING PROTEIN 27	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7357472.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.