Genomic Location: MU827313.1:918345...930388
NR annotation: KAJ7358993.1, Transducin (beta)-like 3 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families
| CDS |
| KAJ7358993.1 |
| Protein |
| KAJ7358993.1 |
| UniProt accession | Description |
|---|---|
| Q5U2W5 | Transducin beta-like protein 3 OS=Rattus norvegicus OX=10116 GN=Tbl3 PE=2 SV=1 |
| Q8C4J7 | Transducin beta-like protein 3 OS=Mus musculus OX=10090 GN=Tbl3 PE=2 SV=1 |
| Q2KJJ5 | Transducin beta-like protein 3 OS=Bos taurus OX=9913 GN=TBL3 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003861 (this species only) |
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF00327 all species → | Ribosomal_L30 | Ribosomal protein L30p/L7e | Domain | Interproscan |
| PF08079 all species → | Ribosomal_L30_N | Ribosomal L30 N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR035808 all species → | Domain | Large ribosomal subunit protein uL30, eukaryotic/archaeal | Interproscan |
| IPR019775 all species → | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR036919 all species → | Homologous_superfamily | Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR020472 all species → | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR016082 all species → | Domain | Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR018038 all species → | Conserved_site | Large ribosomal subunit protein uL30, conserved site | Interproscan |
| IPR012988 all species → | Domain | Large ribosomal subunit protein uL30, N-terminal, eukaryotes | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19854 all species → | TRANSDUCIN BETA-LIKE 3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000472 all species → | Biological Process | endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000480 all species → | Biological Process | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0030686 all species → | Cellular Component | 90S preribosome | Interproscan |
| GO:0034511 all species → | Molecular Function | U3 snoRNA binding | Interproscan |
KAJ7358993.1.
