Gene detail

Detailed information of KAJ7362177.1 in Desmophyllum pertusum

Genomic Location: MU827307.1:2131673...2151229
NR annotation: KAJ7362177.1, Milk fat globule-EGF factor 8 protein [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7362177.1

ATGGAAAGACGTTTACACTCAATCCAATGCATCATTTTGAGTTTGGTGTTTTTGAAGTGTCTTGCTAGCGAAAAAGCTCAGAGGCCTAAATTAAAACTTCAACTCGTCGTAGATGACAGCAAGCCATTGTTTCAAGGAAACAAAACCACACTTCACGTCAATTTGACTCACGACAGCAGTTCATCGTCAGCCGCAACTCAAGTAACACTCCAAATACAAGCTTCTTTAAAAGCAGAGTTTGGCTCGGTTACTTTATCTCCAGAATCAGTGTATCCAGATGCGGAACAACAGAACGGCATCGAGGTCTACAGGCTTGAACTAAACGATGAATTATCAGGTCAAATGGATGTGTCTATTGACCCTCATGGACTCACCGAGCCTGGTCGCACACACATTGCCCATGTGATCGCTACATTGTCATACAGCGGCGATCAAGACGATTACACAGACCCAATCACCGGGAGAAAGCTAGAGAAAGTCATAGAGAATGCTTATACGTCTTTCTACTTCTACGTTTTAGATTCAGATTGTGTACAACCGCTGGGTATGAAGAGTGGGCGCATCAAGGAGGGTCAGCTATTTTCATCATCATTCTACAAAGAAACCCATCATTCACTTGGTCACAGTCCCCACCGAGCTCGGCTTGATGGGCCAGGGTACTGGTCACCAGTTAACGGAAATGCTTCTACTGATGGTGAGCAGTTTCTACAAATTGCTTTTGAGACACCTATTCAGCTGAAAATGGGAAAACCGAATTCTACTGAGCATGTCAAGACGTTTGATGCTTTTACGAGCATCGATGGAGAGGTGTGGAAGATGGAAAAACAAATACTTCCAAAGGTTGTTATCAATATAAATAATGGGGATACCGCGGTTCCAACTGCTTACCAGTCTCTTGCTGCGACGCGCTTTCTACGAATACAGCCGAGAACCTGGTACAAAGAAAGTGCTCTTCGGGTCGAGGTTTATGGGTGTATTCTTCCAGCAACGCCAACACAAGAAGACTTTCCTGCTCTCGGAGTTGAGAAGCAGTTAATTACTGACGCTCAGATGACAGCCTCTTCCGCTTCTGATCCAGTCACGACAAGCGCTTCCAGCGGCCGCTTAAACTCTAACAGTGCTTGGTGTTCGGCAACTTCCAACGAACAACCGCTTTTTCTTCAAATTGATATGAATGAAATACATGTCATTACAGCGATTTCTTCTCAGTCACGCAACACGAATGAAGACAGTTTTGAAAGCGTGGCAAGGTACAAGTTGGGTTATTCCGAGGATGGGTCTAGTTGGAGCATTTATCAACAGAATGGGGTCGACAAGGAGTTCCTTGGGAGCTTAGTTGAGGATATTATAACAAAGCATCACCTGGTTATTCCAGTGAAGGCGCGATACATTCAGTTTCAACCAATAGGAACGATCTCCTCTGTGTGCATGCGCGTTGAACTGTATGGGGAAAGGTCAACTGCAGAAAATACTGATAAGCCTCCAGTGTATCAACGAAGTATCCTTTTAGATGCTGACAATCGAATACTTTTCTTATGCAATAAAGATGTAACCAGCGGTAAATCCGTTTGCTACATAAGAAAATACGTAGACGATGAAAGTTGGATAGCCATGGACAGACGCATCGTCAGCATTCTTGGCTACGACAAAATACAGGACATGATTTATGGTGTGGCGAGAAACAGGAAATCCTACGTACGATGCGATATCACCAAATGTGTGTCCATTACGAAGGGGTCTTGGTTAATGATAAGAGATAAAAGTACCACAATCTTAGCCACGGAGATTGCCTTTGTCCCAGAGACGGCGTCAGCTGTTGGTGTACACCTTTACCGAGAACAAGAGAAGGCATGGAAATTGAAGGCCAAATGGCGAGCTAAGGATCTAAATAGGTGCTACAGTGGACCCTGTGAGAATGGTGGTTCTTGTGTTGGGAATAACAAAAACTACACTTGCACTTGTACAAAAGACTGGATAGGAAGAAGTTGCGAAACCGCTGTTGTTCCCCTTCGAGTTCAAGTTATCAATTTCAGCTGTAATGAAACCACGAACAAAGAACCAGGAACAATAAACAGTCCAAATTACCCTAAAAAGTACAACAACAGCGATCGTTGTTCTTGGCTTATCAATTCCTCGCACCGAGTTCGACTCGTGTTCAAGTCGTTCTCAACTGAACGAGGCTTCGATTCTCTGTTTGTCTACGATGGAAGTTCCGCGTCTTCTCCAAAGATTGGCAAATACCATGGACATCTGCAGGGTAAAGTCGTCGAAAGTTCGGGAAGGTCCTTATTTGTTAAGTTCAAATCTGACTCGAGCGTAAATAAACCTGGATTCTTAATACGTTTCGAAGCTGTATCCACGGCCCCATCAAACTCAACAAGCCCACCAAACCAGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P98070	Bone morphogenetic protein 1 OS=Xenopus laevis OX=8355 GN=bmp1 PE=1 SV=1
Q96PZ7	CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
Q923L3	CUB and sushi domain-containing protein 1 OS=Mus musculus OX=10090 GN=Csmd1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011776 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR050633 all species →	Family	Neuropilin/Multicopper Oxidase/Coagulation Factor	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46806 all species →	F5/8 TYPE C DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0017154 all species →	Molecular Function	semaphorin receptor activity	Interproscan
GO:0030424 all species →	Cellular Component	axon	Interproscan
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan
GO:0098978 all species →	Cellular Component	glutamatergic synapse	Interproscan
GO:0099055 all species →	Cellular Component	obsolete integral component of postsynaptic membrane	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7362177.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.