Gene detail

Detailed information of KAJ7363388.1 in Desmophyllum pertusum

Genomic Location: MU827305.1:27938...41405
NR annotation: KAJ7363388.1, hypothetical protein OS493_009540 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7363388.1

ATGCAGTGCCCCTTTTGCCAAGAAGAAGTTGGTAGCGCAGATGACTTGCAGTTACATTGCTTGGTCTGCACATCGGCCTATGCTGAGCCTGGTATTTCTGGAGCTCCCAGAACGGATTGTGTTGTAGTTCGTTTTCGCTGGGTAAAATCAAGACCATGTTTCGAGAGAGAGGTTCATCTCATAAGCTCGCTGGCAGGTTCTGTAAAACTCCACTGGAAGGAAGATGAAGCGTTGTATGAGTCAGAGACTGTTGGTGTTCCAGTTGGACATCACCTCTGTCAGTTAGCTATTGGTGGTGATGTTGTTCCTACTGAAGAATTTGAAGTCAATGATGACAGTGATGTTATTTTTATCATACTTCAAGAAGCAGCCAATTATGGATACCTGATGTTTGATGAAAGTGACAGGAGGGCAAGGGTCAGTGCTGGTGATGTAGGATCTGATGGTGAACCAGAGCAAGTGGATACACATGACGACAGAACTCCGCGTCCACTTGACATGGAATCAAGGGAGAACCAAACTGAGAATACAAATGTAATGAGTCCACTTTACAGAGAGCTACTACAACACCAGCTCAGCCATGGCGAGCCTTCCTGGGTTCCAGGAAGTGGAGTTCAGTCACCTGTGATGTCGGATGTTGACTTAAGTGAACTTGCTGGTCAACATGATGATGATGATGAACCTCCCATACTGACGCCCCAGCCAGATTCTATAGAGGAACTGCAGCCATCAAGTCCTGTTCTGTTGCAGCCAGGACTGGAGGAAGAGAGTCGACCAGGAGATCTGTCTGGTGAAAGTGATGGTGTGCTGTCACTTCCTGATGGTAGAGGAGCTGATGATCAGAGTGATAGTGAAGCAGAGGAAGTGCTTTCTAGTTCAAGGCCTCCAGCACCACCCTCATCCTCCTCTCCAGTTCCCAACAGCCATAGTGAACACGACAGCCGAGTGTCTTCAAGAGAAAGTCCTGTCAATAGTGTACCCAGTGAGTCAGGTGCAAGAGATGACTCTGTTATAAGTCCCTTACTATATGAGGCCTTTAGGCATGACAGCCCACCTCCAATTACTGGAAGCCCGTTCACTGAAGGAGAACACACAAATGTTGTTCCGCCATACACCTCCCCGCAGACCACACCTGGCAGAGATAATAACTCCACAGAAGAAACAGATCATGTACCTTCTACAGTCCAGACCCCAGCTGAAGAGCACCCTATAGAACATGCCCATTCGTCTCCTAGGGCCAGTCCTCTGGGCTCGGCCGTTCTGGTCCTGGATGCTGTCATAGTTCCCAGCACACTAGATGCATTACCAAGTGACCATGTAGCCACTTCACCTCCTGAACGGCACAGCCCGGCAGGATCAGTCCACAGTAGTTCTTTGTTTTCATCTGGTTTACCAACTCCTATTATGTCTCCAAGAGCCATTCAGTCTGATACAGGCATGCCATTGGCTTCAAGAGGAAGCCCTCTTGGATCCATTCAGCTTCCGCTGAGACCCCAAAGTCTGGGTGGCTCAATTAACCTCTCAGAAATGGTCCCAGTGTCAGAGGACTTGCTGACAACTCTGAACTCTGCATCACATTTGGAAAGTCCTCGAGGACCAGTTTCTGGTGCAGAGGAGTCCCCAATCTCTCCTGCTCTAAGGCAGAGTCCTACAGGGTCCAATCACAGCACCAGCGTTCATCCCCAAGGAGGGTTAGGCTTGGCAGATGATGCTAGCAGACACTCAAGCCAGAGGAGTACACCAAGAACCTCACATTTGAGTCATCGTGAAAGTGGGAACAGTACACCTTCAGTGCCCAGTCCAAGGCAAAGGACATCAGCAGCAGGAAGTCCCACAGAGCTCCTTATGGAGACAGTTTATAGGCGAGGTAGCGGTACACCTCCAGTATCCTCCCATGATGGATCTACAGCACCAACACCTCCTGCGATGCCATCAACAAACTCTAGAGTAAGCCATCGAGGAAGTGGCAATAGCACACCATCTGTGCACAGTCCAAGACAAAGGACATCAGGAACAGGAAGCCCATCGGAACTTCTCGCAGAGATAGCTTATAGACAAGGTACACCTCCAGTATCCTCCCGTGATGGATCTACAGCAGCAACACCTCCTGTCATGCCATCAACAAGAGTAAGCCAGCGAGCCGGAAGTGGCAATAGTACACCATCTGTGCACAGTCCAAGACATAGAACATCAGGAGCAGGAAGTCCAACAGAGCACCTTATGGAGACAGTTTATAGGCGTGGTAGTGGTACACCTCCAGTAGTATCCTCCCATGATGGATCTACAGCACCAACTCCTGCTGTCATGCAATCACCAAGCTCAAGGGTAAGCCATCGAGGAAGTGGTAATAGTACGCCATCAGTGCACAGTCCAAGGCAAAGGACATCAGGAACAGGAAGTCCATCTGAACTCCTTGCGGAGATAGCTTATAGACAAGGTGCACCACCAGTATCTTCCCGTGATGGATCTACAGCAGCAACGCCTCCCATGATGCCATCAACAAACTCAAGGATAAGCCATCGAGGAAGTGAGAATAGTACATCCTCAGTGCCCAGTCCAAGACATAGAACATCAGGAGCAGGAAGCCCCACAGAACTCCTTCTGGAGACAGTTTATAGGCGAGGTACCGGTACACCACCAGTATCCTCTCGTGATGGATCTGCAGACGCAACTCCTGCTGTCATGCCATCAACAAGCTCAAGGGTAAGCCATCAAGGAAGTGGCAATAGTACACCATCAGTGCATAGTCTAAGACAAAGGACATCAGGAACAGGACGCCCATCAGAACTCCTTGCAGAGACAGTCTACAGGCGAGGTACACCTCCAGTGTCTTCACACGGTGCTCCCAGTAGGACATCTAGACAGCAAAGCCCAGCTACCTCAGTTCACAGTCGAGCTGAGCATTCCTCTCCACGTGTCTTATCCCCTCCATTTCCTCACGAATCAGCTATTCCAAGCCATGGAAGTGCATTTGCCACTGTGAATGCAGAGTTTGGATCACCTGCAGTGGGACTGTCCTCGGAGGTAGAGGCTCTCAGGCAGGAAAGGGATACTCTGGCCAGGGAGCTGAGACAGAGGGCCGCTCATTATGAAGCAGAGCTCAGGCGGGTCAGGTCCAGAAATGAGGATCTTGAACAACAGATGCTTAGCATTGAGACCGTAGCCACTCTTACCAAACAAGATGACGAGAAGACACAAGAGCTGGAGCATACAGTGCTGGATCTCAACAGAACTTTGCGAGAGAAAGACGAGGAAATAAGTTCACTGCAGGAGTCTGTGAGGGGACTGGAGAGAACCAATCAGCAGTTAAAGGAGGAGCAAGATAGTTTGAAAACTGTCAATGAACTGAGACTTGAAGACATGAACAAACTCAACTCTGATCTCCAGCAAGAGCTGTCAGATTTACAGCGAAGATCTCTGGAATCAAGCCGAGCCTCACGAGGCAGGAACGAAGGCAAGATCATCGAGCTTCAAGTGCTTCAAAATACGCTCCAACAGCACGTTCAACGACTTCAACTGGAGAACGAGAATCTCCAAACAAAGCTCAAACAAGCAAAGCAGGAAATAAACACGATGAAGGCAATCACAACAACCAGGAACGGCTCAAGACTCAGCAAAGCCAAGAGCGAAACAGACTTGTCAAAGAGATTCGACAAATACACCATGTACGACAAACACAGATACAGAGATCCGGAGCCCTCCAAGACTGTTAGCTTCGCCACGAGAAGCGACAGCTCGGGGCTCGGAACAACTCGGTTTAGTTCGTCGGATGCGAACTACACCCGATCACACGAAGTTGGGGTGTCATCTCCTGTTATAATGAACGGTTATAGCTCGCCAAGGTCAGAAGCTAAGAGATTGTCGTCGTCGTGTGCTTCCCTCCACGACAGGCTGATGCGTGAGCCGCCCACCAGCAGAACTACAGTCCCAAGGCACCGCGTAGGCTCCTTAGGGGAGGACAGCGATGTGTCTGATGATCTAGAGCATGGTGTGGGGTACCATACTGCAACTCAACCAAGATGGCGCACACAGAGCTCCGAGTCTTCAGCTTCGTCGGTTGTTTCGCGGGATCACGACTACAGTACAGATGCGGCGAGGCAGCCAAGAGCGAGCATCTACACCCCGAGCTCGTCTGTGTATGATCAGGATGATTGGGTCAGCGGACGTAGGAGGAGGCCGCATTCATATCACGGAGCAACGGGATCCCTCAACGACGTTCACGGCGCGGGGAAAGACGATTACACTTCTTCATACAACGTCAAGTCTTCACCTTACTCTCACTCACTGCGTGATGTCGGCCTCCATTCTACCTCTTCATCGAGTTATTCCACTAATCCACAGCAACTCACCACGACTCCATACCTTTATCCTCGCACAACTACGAAACTGTTCACCAAGCCATTTGCGCCTTCGTCAAGCGGCGACATTCAGTTGGGTATGGAGGTACTGGTAACTAGGTCACGAGGACAGATTGGCCGCGGTGTAGTGAAGTATGTCGGGCCGTTACCAAGCCGCAAAGACATGTACATCGGAGTGGAACTGGGACCGGGTCAAGAAGGAAAGCACGACGGATCTTTGGATGGACAGAGATTATTTTCTTGTAAACCAAACCGAGGTATCTTCGTCTCCTTCAACAAAGTCGTCATGTGTTATGGTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5U378	Tubulin-specific chaperone E OS=Danio rerio OX=7955 GN=tbce PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002571 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01302 all species →	CAP_GLY	CAP-Gly domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000938 all species →	Domain	CAP Gly-rich domain	Interproscan
IPR036859 all species →	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18867 all species →	RAD50	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000722 all species →	Biological Process	telomere maintenance via recombination	Interproscan
GO:0000794 all species →	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003691 all species →	Molecular Function	double-stranded telomeric DNA binding	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0007004 all species →	Biological Process	telomere maintenance via telomerase	Interproscan
GO:0030870 all species →	Cellular Component	Mre11 complex	Interproscan
GO:0032508 all species →	Biological Process	DNA duplex unwinding	Interproscan
GO:0043047 all species →	Molecular Function	single-stranded telomeric DNA binding	Interproscan
GO:0051880 all species →	Molecular Function	G-quadruplex DNA binding	Interproscan
GO:0070192 all species →	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0090305 all species →	Biological Process	obsolete nucleic acid phosphodiester bond hydrolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7363388.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.