Gene detail

Detailed information of KAJ7365465.1 in Desmophyllum pertusum

Genomic Location: MU827303.1:2641730...2649804
NR annotation: KAJ7365465.1, hypothetical protein OS493_005573 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7365465.1

ATGAAGAAATCCAAAGTGAGTCAAGCTACGCTATTTCAAAGTTGGGGTCATCCAGCTCAATCTACCTCGTCAAGAAATCTGAATTCGAACAGGCTTGAATCAAACACCGGTCAAGCTCAAAACGGGGCCTACAGCGCTTTTGATCCATGTGACATAGTAGAGCTAGGAGATGACGACGATGATGATGAATTACTGGCCGCTGCGGAAAGAATCGCTCCTTTGGACGAGGTTGAATTCCAAGCGAATACAGCAACAACTAACATCGCAATCAATCCCGACGAACTTGAAGTTATTCCGGGTTTCGATCTCGAAGCAGGGAACGTTTGGATCTACCCGACGAATTATCCTGTAAGGAATTATCAGTACGATATTGTAGAGCAAGCTTTATACAGGAACACTTTAGTGACTTTACCAACTGGTTTGGGAAAGACTTTTATAGCCGCGGTTATCATGTACAATTTCTATAGATGGTACCCACAAGGAAAGGTCATATTTATGGCTCCCACGAAACCACTGGTTGCACAGCAAATTGAAGCTTGTTACAATATTATGGGGATTCCACAATCAGACACAGCTGAGATGACAGGAAACATGGCTCCCAATAAACGGCAATCCTTGTGGGAAAGTCGGCGAGTTTTCTTTCTCACTCCTCAAGTTCTGCAGAATGATCTGAACCGTGAATCATGTAAAGCAGAACAAATTGTTCTTCTTGTGGCTGATGAAGCTCATAAGGCTCTGGGAAATCACGCCTACTGTCAGGTTATTCGGGAAATAACTGGTTACACCAGGAATTTTAGAGTACTTGCCCTCAGTGCAACACCTGGAGATGGTCTTGAGGCTGTTCAACAAGTCATCACCAATCTTTTGATCTCGCACATGGAGCTTCGCTCTGAAGAGTCACCAGATATCAAGCCATATACGCACAGCCGACTGGTGGACAAGGTGGTGGTCTCACTTGGAGAGGATATCTCTAAAATTAAGAGGTCATATTTGAAGATCCTGGAAGCTGTTGTGGGCCGTCTGTTTTGCCAGCGAGTTCTGCAGAACAAGGATCCTCAGCGAATCAGTAAATTCTTACTGTTAAGATCAAGAGATCAGTTCAGGACAAGGATGAACGAACAGGGAGGATTTGACCGTAACCGAGTGGGGCAGATTGAGGGGGACTTTGCCATGTGCATCAGCTTGTACCACGCATATGAGCTCCTATTACAACATGGCATCTTATCATTCTACAACTTCATCAAGGCGATCATGGACGGAACAAAAAGCATCGGGCGAGCCAAGGCCGAAATCACCAAGAATCACGAGTTCACACAGCTCATGGATGAACTGCGAGAGGAAATTGAACCTCCGATGGAAAACGGCGCCAATGAAAGCCTTCTGTTCTCTCAATTTTCACCCAGAAGGCGCGCACTCATGAACGTTCCCAAGCCGAGCGCCACCTTCAAAAGTCATCCCAAGCTTATGAAACTGAAAGAAATCGTTCTTGAGCATTTTGAAAAGTTTCAAGACAAGAGCGGTGGGGAGAGCAAGGGTGTGGCCACTCGTGTGATGATTTTCTCGCAGTACAGGGACAGTGTGAACGAGATAGCAGGCTTGTTATCTCGACACAAACCGCTGGTGCGAGTGATGAGTTTTATTGGACAGCAATCATCTGGGAAGAGTACCAGGGGACTTACACAGAAAGAACAGCTGCAGGTTGTACAGCGGTTTCGTCAAGGTGGATATAATACACTAGTGGCCACGTGTGTTGGCGAGGAGGGCCTGGACATAGGCGAGGTGGACCTCATTGTTTGTTTTGATGCGCATGCGTCACCCATTCGCCTGGTGCAGAGAATGGGGCGAACAGGAAGAAAGAGAGATGGTCGAATAGTTATTCTTGTTACTGAAGGCAAAGAGGAACAGGTTTACATGAAAAGTCAAAGAAGTAAAAAGTCAATTCACAAAGCTGTGACCCAAGCAGCCAAATCATTTGACCTCTACACAGACAATCATCGGATGGTTCCACGGCAAATCATCCCTGCTGTGCTGAAAATGGAGATGACAGTTGGAAAGTATTTAGGTCAAAGCAAAGGCAAAAAGGGAAAGACTTCAGACGGTGCTAACATCAAAAACTTCACAACCAAATCAGCAACAGCCACATCCAAGAAAAGTAACGGCTTTTTGACCTACGAAGAATTAATTTACTGGCAGGAGCATTTCAAACTGCCAGATCACGAGGCTGGCTTGTCGCCACAGCTCTCCATCACAAAGAAATCCAGGCGCTCCTCATCAGAGTCTAAGAAACCTGTCACGCAACCCTCTTTGACGGAATGGCTCCCTTGGCAAACTACACTAAACCCTGTCAAGGCTGTCACGCACTCTCGGCGTACAGAACATTTGGTAGAACTGTTAGAGTTCACGGAGCTTCATGGCGGTCGAGGTGATGACGACGAAAGCTACGATCTGGAAATGATGTCGTTTTTAACGACGAAGATATCTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IYD8	Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2
Q8BGE5	Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3
A0A1D5PRR9	Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003347 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04851 all species →	ResIII	Type III restriction enzyme, res subunit	Family	Interproscan
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF16783 all species →	FANCM-MHF_bd	FANCM to MHF binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006935 all species →	Domain	Helicase/UvrB, N-terminal	Interproscan
IPR039686 all species →	Domain	FANCM/Mph1-like, insert domain	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR044749 all species →	Domain	FANCM, DEAH-box helicase domain	Interproscan
IPR031879 all species →	Domain	Fanconi anemia group M protein, MHF binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14025 all species →	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0000400 all species →	Molecular Function	four-way junction DNA binding	Interproscan
GO:0009378 all species →	Molecular Function	four-way junction helicase activity	Interproscan
GO:0036297 all species →	Biological Process	interstrand cross-link repair	Interproscan
GO:0045003 all species →	Biological Process	double-strand break repair via synthesis-dependent strand annealing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7365465.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.