Gene detail

Detailed information of KAJ7365674.1 in Desmophyllum pertusum

Genomic Location: MU827302.1:1414479...1433153
NR annotation: KAJ7365674.1, RNA binding motif protein 33 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAJ7365674.1

ATGGATTTTTCAGAAATCCACGAAGATGAACTAGGGAGCCTTGGAGTTGACTTTGAACACGGAAGACGAGGTCCCAGACCACCGTTCAGACACCATGGACCACATCCATTCCCACCCTTTGGACCACATGGACCTCGCATGCCCCCAGGAGGTCCCATGTCAAGACCGCCAGGTCCTATGATGATGGGACCCCCAGGACCACATCCCCATGGACCCCTTGGGCCCATGATGCGTGGTCGCATGCCTGGCCCCCGTGGCCCCCCCATGGGAATGCCAGGACCCATGAGACCAAGGCTCCCTCACGATGGGCCTGATGGACCGTGGAACGACAGGGGCAGGGGAAGGAGACCTGCAAAGCACCAGCTTCAACGACAACCAAATAAAGAAAGTCCGAAAAAGAAGAACTTCGCGGCTGATAAAATAAAAAAAGAAGAATCCAAAGCTGCTGATGGAGAAGTAAAAGGACCAGCTGCCAAAAAGCCTAAAAAGGCAGAAGATGACTTGGAGGATCTTGATGAGGAAAAGCTGTTGAAGAGTGATGATGAAGGTGAAGGTGCTAACAATGTTGATTTGGATGCTGTGAGCATACATGGTGATGACGAGTTGGACGACATTGATAAAGAGATCAAAGGGCTTTCCGAAGGTGCAACTGAGAACAGCAAGAAGACGCCCCAGAAAGTTGAAGTGAAAAAGGAGCCTAATAAAATTATTACCACAGTCAAAGATAAAATCAAGAATGATAGTGACAGTGAAGATGAAGGCAAGAAGGACAGACAACGCTTCAAGTCTGAACGACCGAAGGAACAACACAAGATTGTGAAACATGAGCCAAGGAGGGACTTCAAGAAACATGATGACAGAAACTGGAATCGAAGAGATGCAGGAAGGGGTCGTGGCAGAGGAGGACCAATGATGGGGCCACCACCACCAGGAATGATTCGACCAGGGATGCATGCTCCGTTTCCTCCCAGAGGTCCAGATCCCTTTATGCATGGCCCTAGACCTGGGATGGGACCTGGTCACGGGCCAGGGCCAGATCATGGTCCTGGATTTGGTCCCAGACTACGCTTTCCACTTGGACCCAATGGACCACTTCCTGGTCATATGCCTGGACCACCAGATGGCGCGTTCCTGCCACCAAGGCCACCACAGGGAAAGAATATTCACATCAACCCTCACTTTAGACCTCCGCCAGGTGGACGAGGAATGCCAGAGGGTCCACCTCCCATGCGTGGACCACATCCCGGTCCTCCGAGACCAGAGATGCCAGGACCTCGTATGCCAGGTCCCCAGTCAGGTCCAATGCGACCCCCTGAGGGTGCTTTTCCACCAGGCCCTGGAGGAGATTTCGGACCTCGAGGACCACCTCCTGTCAGAGGTCCCCGTATGGGTCCAGAACAGGGACCCAGACCTGGGATGGGGCCTGAACCAGGTCCAAGACCCATGGGCCCGGGTGGTCCTGGCCCTCTGCCAGGTCCTGGGCAAGGATCTGGTCCGAGATCTGGTCCTGGTCACTTTCCTGAGAATGAAATGAGGCCACCCCATGGAATGGGACCTGGTGTAAATATGATGTCACAACCTAGGGGACCTCCTCCAGGGGTGCCAAACATGATGCCACCACATGGTCCCTTATCAGGGCGTGCCCCAGGTCAAGGAGCGCCAAGTGCAGGACATCACAGCGGTGCACCCGGAGGGCCTAGCCCCTTACCAGGGCAGCAGCACCCAGCCATGCCACCGAGAGGACCTTCACATGGGATGCCTCCTCCAGCAGTACCCCCTGGAGGCCCAATGCACCCAGGCGCCATGCAGCCAGGGATGCGACCACCAGTTATGTCAAACCAGCATCCAGATGTGGCCATGTCTGAGCCTGATCGAATTGTCATTGGTAATCGTGTCACAGTGTCTAATATGGATGTTGGCAATTCGGCAATGCGAGGAGTGCCACCACCAGGTTACAATGCAGCAGGAGCAGCGGCAGCAATGGCTGCAGCACAAGGAGCAGGATTAGCTGCAGCAGCAGCTGCAGCAGCTGCTAGGCAACAGCAGTATCCCTACGGACAGCAGTATCCTTATGATTATGCTGCTGTGTATGGTGCAGAGTGGCAGCAGATGATGCAGCAACAAAGCAATGCTTATGCTGCTGCTGCTGCATATGGTCTGGATAAACACCCAAAGACTAGACACAAATCAAAGAAGCACCCACTGCGACATTACAGTGCTGACAGTGCAGAGAGCGACTTCAGCAGTGCTTCAGGGTCACCATCAAGATCATCGTCGCGCTCCTACTCCAGATCACCTGCAAGGTCTTGGACCCGCTCACGCTCATTATCATTATCAAGGTCACGATCAAGGTCATCATCAAGGTCAAGATCATTCTCAAAATCAGTCTCGCCACGACCTCCTCAACCAAGGTCACCTCTGCGCGCAGCTAAGCCTGCAGTCCCCCATCCAAGACGAATTGATCCTCGCAGGGAGCGTGACAAAGAAAGACCAGACAGAAATCGCAAAAGAGAAGGGACAAGAGACAGGCCAAGAGAACGACCAGACAGAAACAGAGAAGCGTACAGGAACCGCGAGAGGAATGAAAGAGAACGAGAGAAACCCAGAGAGCGAGAACCACGTGAACAAAGAGACCCACGAGAACCACGCCATGACAGACCACCACGAGAGAGAGAACGAGAGAGGGAAAGAGGGGATCGTGACAAAGCAAAAGAGAGGGAACGGGACAGAACTAGAGACAGAGAGAAGCCAAAGGATGGTCACAGAAGAAGTCGAAGCAGAGATCGATCCTCTCACAGACGAGAGAGTAGGGAATCGAGACATTCTGAAAACAGTTCTTCCAAGCGTATTGTGGTTGGCCCTTCAGAAAGTAAGAGTAAGACATCTGGTTCAACACCGGACTCGAAAGCCAATCGTGTTGTCGTAACCAAGGCATCTAGCAGCGGAAAACCTTCAAACCAGGTTGTGATTGGTTCATTACCTGAGGCAATAACACCAGGCAGACTGAAAGAACTTCTGCAGGGGATTGGTCCAATTCAGCAACTGAAAATGTCTACAACAAAACATAAGGCATTGGTGACTTTTGAGAAAAATGAACATGCCTTGGCTTGTCGTCGCAAGTTTCACAGGACTGTAGTTGACAATAGCCAAGTGACAGTTGACTTCCTCTGA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR039878	Family	RNA-binding protein 33	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22014	RNA-BINDING PROTEIN 33	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan