Gene detail

Detailed information of KAJ7365958.1 in Desmophyllum pertusum

Genomic Location: MU827302.1:6609093...6635217
NR annotation: KAJ7365958.1, hypothetical protein OS493_002696 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7365958.1

ATGTTAGGAGGCACGAACGTCAAAATGAGCGGACCCTGCTTCACCGCGGAGGACAACATTGTCGTTCAGTTTGATAACGAGGTTAACATCAATGCTACTTTTGGCAGTGAACTGCAGTCCTCAATCACTATACCCGTATTGAACAAGACGGGAAGGTTGCCAATCAAACTCTCCATTGATGGTGGGAATTCTTTCGATTACAGTGCAGTTTACACATCAGTACCCATCAATCGATACACACCCGGTGTCCAACGAACAGACGGAGATTTATGGCAGGAGGATTCCTCAGTGGATATCAGTTGGGACGCGGGAAGTATTGGAGGCGCTGACGATCAAGTATCGATTGATTTGGCTCGCTATAAGATGGACGATGATGATATACCGGTACTGGACAGCTTTCACACTGCAGTGGACACACAGTCCAACACTGGTCACAGCCAGTTTGTTGTTACAAAAGGACAAGGGGACGGGTGCAAGAAATGGCATCTGAAGGAACCCAGTCCAGACAAATTCAAAGGTGATCCCAGCATGCAACCGTGCCCCAGGATTTTGACACAAGCCATGGTGATCGCGGGCGCTTCATGTCCGATGAAGAGTGCAATCCTTCCAATAGAGAAGGTTGTTCTCGCTACCATCAAGGAGCTGTCAACTGTTTTAAAATGGTCAAATCCCAGTGCCACAGGTGCCGGTCAACAGTGTTGTTATAACAGCTTTGGTAACTTGATGATGGGCAAACCAGATGCAGGATCTCTTGATCGAGTTCATCCTAATGCTGGGGTTCCCGTGATATCCCACTTCTTCCACGACATAGTTCCGTACCAGGACTGCTGCCGTCTGACGGACAACTGTGACAAGTATTTTGATAAGCGCCCTTCAGATGATGGCTCACAATATCAAGCGCCGAGACCTGCGACCGGATTTGGTGACCCACACATGGTGACGTTAGACGGTACGCCCTTCACGTTCAATGGTTACGGAGAATACTTCATTTTAAAAGTGAGCGGGGTGGACTTCACTTTGCAGGGGCGCATGCAACCTCTTGTAGGAGACGATGGAAGTTTATCACGTGCCACTGTTTATACAGCGTTTGCCGCCAAGGAGCACGGATCAGATACAGTGCAGATTCAGTTAAATGGCCGTGGATTGGTTGACGTTTTGTACGAAAACACCTTCAAATACTCCGCCATCTTTAATTCTGGGATCTCCGTTACCGTAGAAGGGCAACAAGAACTGCTTGGTCTCGTGACTTTGGTACCAACCATTTTCAAAGGGAATACAACTGGGCTCCTTGGATACTGGGATGACAGTAAAGAGTCGGAATTCCTTCGACCTGATGGAACTTTCCTGACCACGAACGCCAGCCTCGAAGTCATACACAGGGATTTTGGACAGCTATGGGTTACCAAACCAGACGAGTCACTGTTTGTCTACCAGCAAGGACAAAGCCACTCTACATTTCATAATCCCAGTTACCAGCCAATTTTCCCAGACAGCCAAAGCTTGGTCTTCACCGATAAATCGCTTGAGAAGGAGGCTCAGAACATTTGTGGAGACAGCTCGGAGTGCTTGTTTGATATTTTTACTACTGGAAAAGTGCGAATCGGAAGAGCAACAAAAGAAACTGTGAAACAATTTGTTGCCGTGGTCAACGATACTGTTAAACCAGCTTGTATGCCGCTAAATTCTCAGCTAGCTGATGGTGTTGTACACAGAAATGACACGGAAGGTGGAATCGATTACACGTTTGTGTGCAACAGAGGTTTCATAATGAACGGTTCAAATCACGTGACATGCAAAGATGGAGTTTACAACGGAACAGCCCCAAACTGCTTGCCAAGAGAGTGTCCCGCGCCTGGTCCAGGTAACCTCGCTAATGGTCGTGTACAAGGGAATGGCATTGTTTACCGTTCAACGTACCACTTTATCTGTAACGATGGATATGTACTTTATGGTCATAATATCATCACATGCATAGAAAATGGCACCTGGAACGGCACCATACCCAGCTGTTTGAAAGAGTGTCCATTACTTCCTTCATCCATATCCAACGGCGACGTCGATGGTTCTAGTCACCTGCAAGGCTCACGCTACATATTTAGTTGTCACGATGGTTATTCTCTCGTTGGCCAGGACGTTTTATACTGTACTGAGGAAGGAAGTTGGAATGCTAGTATTCCTACATGTCTGAGAGAGTGTCCTCCCCTTCCGTCGTCAATAACAAATGGATTTGCCCATGGCAGTGGCTCAGTGGAAGGGTCTCAGTACCAGTTCAGCTGTAAGAAAGGATATTCACTGGTAGGAGCGAACACACTGTACTGCAGCGATCAAGGAAATTGGAATGGCTCTATCCCAACCTGTCTCATCGAATGTCCGCAACTGCCTTCCTCTGTACCAAATGGCCATACTTATGGCACAGGCTTTTTACAAGGTTCCCTCTACAGATTCAGCTGTAGGCAGGGGTATTCTCTTATTGGACACAAAATGTTGCTGTGTACCCAGGATGGAAATTGGAATGCCAGTGTTCCAAGATGTCTTAAAGATTGTCCTAGCCTTCCTTCGTACATACCAAATGGAATCGGAAACGGAACTGGTTCAGTGGAAGGATCTCACCATCATTTCAGTTGTAACAAAGGATATTCACTTGTAGGGCGACACACATTGTACTGCAGTGACAATGGTACATGGAATGGCTCTTTGCCTACATGTCTCATAGAATGCCCACAACTACCGTCTACAATACAACACGGCAACGTTAATGGTTCAGGCCACGTGGAGGGTTCTCTACACAGATTTAGTTGCATCAATGGTTATTCCATTGTGGGACAAGATACTCTGTTCTGCAATGAGATGGGTCAGTGGAACGACAGCGTGCCTAGATGTCTCCGAGAATGTCCCATTCTCCCATCATCCATAGCGCATGGTGTCATCAACGGCAGTGGCTCACTCGAAGGTGCTCGGTATGAGTTCAACTGTGATAGGGGATATTCACTTATTGGGGTCGATACAATAGTGTGCACGGATGCTGGGGTATGGAATGGCTCGCTTCCTACTTGTCTCATAGAGTGTCCACGACTACCTTCGACGCTAAAACACGGCACAATTAATGGCTCAGGCCACGTGGAGGGCTCTCTGCACATATTTAGTTGCATCAATGGTTATTCCATTGTGGGACGGGATACTCTGTCCTGTACTGAAATGGGTCGGTGGAACGACAGCGTGCCTAGATGTCTCAGAGAATGTCCCATTCTCCCATCGTCCTTAGCGCATGGTGTCATCAAGGGCAGTGGCTCACTCGAAGGTGCTCGGTATGAGTTTAGCTGTGATAGGGGCTATTCACTTATTGGGGTCGATACAATAATGTGCACTGATGCTGGGACGTGGAATGGCTCGCTTCCTACTTGTCTCATAGAGTGCCCACGACTACCTTCAACGCTAAAACACGGCAAAATTAATGGTTCAGGCTACGTAGAGGGCTCTCTCCACAGAGCTAGTTGCATCGATGGTTATTCCGTTGTGGGACAGGATATTCTCTATTGTACTGAGATGGGTCGGTGGAACGCCAGCGTCCCTATTTGTCTCAGAGAATGTCCTAGCCTACCGTTATCCATAGCGCATGGTTTCGTCAATGGCAGTGGCTCACTGGAGGGGGATCGATATGAGTTCAGTTGTGAGAGGGGATACTCGCTTATTGGGATCGATATGTTAGTTTGCACTGATGCTGGGGTGTGGAATGGCTCGCTTCCTACTTGCCTTATAGAATGTCCAACACTTCCTCCGTCCATACGACATGGTTACGTCAATGGTTCGGGATCAGTACACGGTTCTGTGCACATATTTAGTTGCAAACATGGCTACTCACTTATGGGTGAACAGAATCTGTACTGTACTGCAGAGGGAAGATGGAATGGCAGCATCCCCAGATGTCTTAAAGATTGCACTCCCCTTCCCTTATCCATATCAAATGGTTTCGTCAACGGAAATGGGTCCGTGGAAGGGTCTCAGTACCAGTTCAGCTGTAGACAAGGATACTCGCTTGTAGGAAGAGAGACATTGTACTGTAATGACAAGGGAGCATGGAGTGCCTCTGTGCCAAAATGCCTAAAAGAATGCCCTTCTCTGAATGCAATAATTGATAACGGTTACAAACATGGCAGTGGGTCAGTAGAAGGTTCCTTGGCTTGGTTTAGCTGCAAAGACGGTTATTCTCTTATCGGAAATCAGTATTTGTACTGTGACGGGAACGGACATTGGAACGGTACCTCGCCAAGCTGCTTGAAAGACTGTTCGCAAATCAACAGCACCCTAGAACATGGTTACATCAGTGGCAATGGATCTACATCAGGTGAAGCTTATAGCTTTCACTGTGATGATGGTTACAGCATTGATGGAGAAACCATGCTGCGTTGCAATGAGTACGGACAGTGGAATGGCAGCATCCCTGTGTGCTCAAGAGTCCTTACAGGTAAAAAGGAAACAAGTATGGCCTGGTACGTCTACGCAGCTTCTGGTACCGGCAGTCTGCTATTTGTTCTTATTGCTGCAGGTCTTTTGGTACTACTGTGGCGTCGACGTAGGTCAAGTGTAAAACGGGAAGAATCCCCGAGCGGTGTCGAAGAGACAGAGATGGAAGCGATGGTGACTTCTCCAAAGAAAACTAAAGTCGAATGCAACGATTTGCTTGTCAGTGATGGTTCTGAAGCTCCTCCTACTGCGGTATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A1D5NSM8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1
Q4LDE5	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
P0C6B8	Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000637 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00094 all species →	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF03782 all species →	AMOP	AMOP domain	Domain	Interproscan
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR001846 all species →	Domain	von Willebrand factor, type D domain	Interproscan
IPR005533 all species →	Domain	AMOP domain	Interproscan
IPR050350 all species →	Family	Complement & Cell Adhesion Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19325 all species →	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Interproscan

Gene Ontology

No Gene Ontology signature was detected for KAJ7365958.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04011	CR1, CD35; complement component (3b/4b) receptor 1	-	CD molecules	ko04090	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.