Detailed information of KAJ7369798.1 in Desmophyllum pertusum

Genomic Location: MU826886.1:282137...287463
NR annotation: KAJ7369798.1, Syndetin [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1LSG8Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1
Q96JG6Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3
Q8CI71Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003524 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10474
all species →
Syndetin_CSyndetin, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040047
all species →
FamilySyndetinInterproscan
IPR019514
all species →
DomainSyndetin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13258
all species →
UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000149
all species →
Molecular FunctionSNARE bindingInterproscan
GO:0032456
all species →
Biological Processendocytic recyclingInterproscan
GO:0042147
all species →
Biological Processretrograde transport, endosome to GolgiInterproscan
GO:1990745
all species →
Cellular ComponentEARP complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7369798.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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