Gene detail

Detailed information of KAJ7371519.1 in Desmophyllum pertusum

Genomic Location: MU826845.1:468717...482498
NR annotation: KAJ7371519.1, Elongation factor 2 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAJ7371519.1

ATGAGCAGGAACGCTGCATTACCATTAAATCAACAGCCATCTCTATGTACTATGAAACTGTCAGACGAAGATTTGCAATATATCGAGGGTGAACGAGAAGGCAAGGGCTTCTTGATTAACCTGATTGACTCGCCTGGACACGTGGATTTCTCATCAGAAGTTACAGCTGCTCTACGTGTAACTGATGGTGCTCTTGTTGTTGTAGACTGTGTTAGTGGTGTTTGTGTCCAGACTGAGACAGTGCTGCGGCAAGCAATTAATGAGCGTATCAAGCCTGTCCTTTTCATGAACAAAATGGATCGTGCACTTCTAGAACTTCAGTTGGAGAAGGAAGATCTGTACCAAACCCTCCAGCGTATTGTGGAGAGCATCAATGTCATTGTTGCGACTTACGCTGATGACGATGGTCCAATGGGAAATATACAGGTTTCTCCAGAGAAAGGAACTGTGGGTTTTGGTTCAGGTCTCCATGGCTGGGCTTTCACCCTAAAGCAGTTTGCAGAAATTTATAGCAAAAAGTTTAAGATCGAACCTGCTAAGCTGATGAAACGTCTATGGGGGGACCAGTTCTACAATCCCAAAACTAAGAAGTGGAACAAGACTGAGGGAGAAGGTTTTACACGTGGGTTTAACCAGTTTGTTTTGGACCCAATATACAAGATGTTTGATGCAATCATGAATTTCAAGAAAGAGGAAACGGCAAAACTGCACGAAAAGTTAGAAATTAAACTCACTAAAGAAGAGAAAGACATGGAAGGGAAACCACTGTTGAAGAGGACGATGCTGAAGTGGCTACCAGCTGGTGATGCCTTGCTTCAGATGATCACCATCCATCTGCCATCGCCTGTCACAGCTCAGAGGTACCGGATGGAGTTGCTTTATGAAGGACCTCTGGATGATCCTGTTGCCCTAGGAATTAAAAACTGTGACACCCAGGCTCCATTGTGTTTGTATGTCTCCAAGATGGTTCCGACTGTAGACAAAGGCCGCTTCCATGCCTTTGGGCGTGTGTTTTCAGGAAAAGTGGCAACAGGACAGAAAGTACGCATCATGGGCCCAAACTATGTACCAGGAAAGAAGGAGGATTTGTATAACAAATCCATTCAAAGGACTATTTTGATGATGGGACGCTACACTGAAGCCATTGAAGATGTTCCTTGTGGCAACATTGTGGGGCTTGTTGGAGTGGATCAGTTTTTGGTCAAGACGGGTACTATTACTACCTATGAAAATGCCCACAACTTAAAGATGATGAAGTTCTCTGTGTCGCCAGTGGTTCGTGTAGCTGTCGAAGCAAAGAACCCAGCTGATTTGCCTAAGCTGGTGGAAGGCCTGAAACGACTGGCTAAGTCTGATCCTATGGTACAGTGTTTAATTGAAGAAAGTGGAGAGCACATCGTGGCAGGAGCCGGGGAACTGCATTTGGAAATCTGTCTGAAAGATTTAGAAGAGGATCATGCTTGCATTCCTCTCAAGAAATCAGATCCAGTGGTGTCTTACCGTGAAACGGTTTCTGAAACATCCGCCTTCACGTGTCTTTCAAAGTCACCAAACAAGCACAACCGTCTGTTTATGACAGCAGCTCCTTTCGGAGATGGTCTAGCTGAAGATATAGACAGCGGAGATGTGTCTTCAAAGCAGGATTTTAAAGCTCGTGGCCGCTACCTGGTTGAGAAGTATGAATGGGATGCAACAGAATCACGTAAGATTTGGTGCTTTGGACCTGAGGGAACTGGTCCAAACATGGTGGTTGACTGTACTAAGGGAGTACAATATCTGAATGAAATCAAGGATAGTGTGGTAGCAGGATTCCAGTGGGCATCCAAAGAAGGTCCTCTCTGTGAAGAAAATGTGCGTGGTGCAAGGTTCAACATCCATGACGTCACCCTTCATGCTGATGCCATTCATCGAGGTGGTGGACAGATTATTCCAACTGCCCGTCGCTGCTTCTATGCCTGCATGTTGACTGCCAAGCCAGCTTTGATGGAACCAGTTTATTTGTGTGAAATCCAGTGTCCAGAGTCTGCAGTTGGAGGCATTTATGGAGTGCTGAACAGGAGACGAGGGCACGTTTTTGAAGAAGGCCAAGTAATAGGAACTCCCATGTTCCATGTTAAGTCATACCTGCCTGTAAATGAGTCCTTTGGTTTCACTGCAGATCTTCGATCCAACACTGGTGGCCAGGCCTTCCCTCAGTGCGTGTTTGACCACTGGCAGCTCATGCCAGGTGATGCCACAGATCCAACATCAAAGCCTGGACTAGTGGTGGTCGCGACACGGAAGAGGAAAAATCTTTCTGATGAATTACCACCTTTGGACAGGTTCCTTGATAAACTATAA

Transcript

Protein

Uniprot

Uniprot term	Description
A0SXL6	Elongation factor 2 OS=Callithrix jacchus OX=9483 GN=EEF2 PE=2 SV=1
Q3SYU2	Elongation factor 2 OS=Bos taurus OX=9913 GN=EEF2 PE=2 SV=3
P13060	Eukaryotic translation elongation factor 2 OS=Drosophila melanogaster OX=7227 GN=eEF2 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF00679	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF03144	GTP_EFTU_D2	Elongation factor Tu domain 2	Domain	Interproscan
PF03764	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan
PF14492	EFG_III	Elongation Factor G, domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR005517	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR000640	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR035647	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR004161	Domain	Translation elongation factor EFTu-like, domain 2	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR041095	Domain	Elongation Factor G, domain II	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03234	EEF2; elongation factor 2	-	Exosome	ko04147	deepkoala