Genomic Location: MU826842.1:1041685...1043154
NR annotation: KAJ7371817.1, hypothetical protein OS493_023158 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families
| CDS |
| KAJ7371817.1 |
| Protein |
| KAJ7371817.1 |
| UniProt accession | Description |
|---|---|
| P46850 | RNA-splicing ligase RtcB OS=Escherichia coli (strain K12) OX=83333 GN=rtcB PE=1 SV=3 |
| P0DX92 | RNA-splicing ligase RtcB1 OS=Escherichia coli (strain ATCC 25922 / DSM 1103 / LMG 8223 / NCIMB 12210 / NCTC 12241 / WDCM 00013 / Seattle 1946) OX=1322345 GN=rtcB1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0009009 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01139 all species → | RtcB | tRNA-splicing ligase RtcB | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052915 all species → | Family | RNA-splicing ligase RtcB-like | Interproscan |
| IPR036025 all species → | Homologous_superfamily | tRNA-splicing ligase RtcB-like superfamily | Interproscan |
| IPR001233 all species → | Family | RNA-splicing ligase, RtcB | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43749 all species → | RNA-SPLICING LIGASE RTCB | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003909 all species → | Molecular Function | DNA ligase activity | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0008452 all species → | Molecular Function | RNA ligase activity | Interproscan |
| GO:0030145 all species → | Molecular Function | manganese ion binding | Interproscan |
| GO:0042245 all species → | Biological Process | RNA repair | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
KAJ7371817.1.
