Gene detail

Detailed information of KAJ7372196.1 in Desmophyllum pertusum

Genomic Location: MU826838.1:1407752...1417264
NR annotation: KAJ7372196.1, TatD DNase [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7372196.1

ATGACCGCTGTAATGGAATACACTGACGAGCAACTGAACTACTACAGGATTTGTTATGTTACCACTGATGTACTAGCCGAGGGTCTGCGATCAATCTTCAAACAGGAATGGGACAATCGCTACAAGGCAACATTAGGAGAATGGAAAGATGAGCCTAGAAATGGACTGGACTTTTGGAATGGGGAATCTCCTCGGAATCAGAAAAGAAATGCCCACATGTTAGCTACCATGGTTAACGGTAACAGAGCAGAATGGGATTGTACCATGCTGTTTTACGCCATACTTTTCTCAGATTGTATCCACAGTCTCAATCCAACAGTCAAATCAAACGTGGATGATCTTAGAAAGTTTCGGAATGAAGAATTTGCTCACATGCCACAAGGTCATCTCTCAGACGTAGAGCTTCAAAACGCCATTACCAAAGTTCATGCTGCGTTTCAAGCACTCGGTCTCTCCACTTTGCAGATTCAAGACATCAGGAATCAGACAAGTTTTCTCACGGAGGAGTTAAGAGGTGTCTTGAAAAAGGTTGACGACCTTAAAAAGGAACTTCAAGATAAAGAAGATCAACGACAAGTCCTTGAAGATCAGCTACAAAGCGACATTTCTCCCTTTTGCATTCTTCCTCCTAAACCTTCACACGACGTCGCAAGTCGAGACTGTGAGGTGGCTGAAATTACGCAACAGCTCAAAGAGCTTAAAAGTGCCAATGAAAACAATTTAAGTTACTTGTACATCTCAGGGAATCCAGGTAGTGGCAAATCTCAGTTGGCCGGCCTCGTTGCGAAGCGATTCTTCGACGAAGTCAAAAAAATTCCGAGTGCAGCAGCTGCTTCATTTGTAATGACGTTAAACGCTGAAAGCCCAGACACACTTCTGGAATCGTATGTCTCTTTCGCTCGCCATCTAAAATGTCCGGAATATGCAGTTACAAACACGGTTAACTCCAAGGATTTGAAGACAGACGAAAAGATCACCAATCTTAAGGCGTTAATTAGCACAAAAATCGAGCTTTACACGTCGTGGCTACTGGTAGTCGACAATGTCACAGTCAAATCACGTGTGCATGCTCATTTGCCGGAGTCTGGAAATGAGCAGTGGGGAAGGGGCCAATTGCTAATCACAACACAGGATAGTGCGTCTATCCCTTTAACAAGCTCTTTCATTCAACACATCTCAGTTAGCAAAGGTATGGAGCCTCACGATGCCAGTTCTTTATTAGCAAAGCTTTCCGGTATCGCTGACAACGAGATGGAAAAAGAAGTTGTACAAGCGTTGGACTACCAACCCCTTGCCTTAGCAAGCGCAGGCATCTATGTCAGACAGGTTCGGCAGAACAAAGCAACTTCAAATTTTGACTGGAACGACTTCCTGAAAAAACTGGATACAGGCCAGCGAGGTACCACTGAGGCCATTCTTGCCGAGACCAACCCAAGCTACCAAAACTCCATGACAGCAGCAATAACACTAGCCGTTGAAAAGCAGATGACATCAGACAAAGTCATTGATCACACGTTCAGATTCCTCTATCTGTGTGCACCACAGCCATTAAGCCTAGACATCGTGATCAATTACATTCTCGACGTAGATGAAGAAATTGAAGATAAAGAGATGATTAGTATGAGGATCCAAAGGTGTTCATTGTTGTTATTTGAAGAAGAAGAGAATGACGTCTACATTCAAGTACACCAGGTCGTGCATGACGTCATTAATACTGTGGTTACAGACCTTCCGGAGATTCAACGCCTTCAAGTCGTAAATGGTGCCGTTAGATCATTCACCCAGTTCATAGAAGAGAATCACCTACCAGAACATTGGAACGACTTAGATTATCTTGTAAACAGGAAGCACATTGTCCCCCATTTAAAAACCCTCATTATTAAAATGGAAGATTTGTTTTCTAAACTGAACCTATCTCAAGTCGTCCAAAGCGGTATCTTCAATATCCAATGCTATCCACGTAACTTTCAAAATCTTGGCCAAATGTGTGACAAGCATTCTGAGTTTTACGCAGCAAAGAAGTACTTTTACATGGCATTAGAATTCATTCAGTGTAGTGACGTATATAATGACGTAGATGTGGCGGCCGCCTACGTTAACATAGGAAATGTACACAATCGCCTGGGTGACCTGCAGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACTTAAAGCTGGGTGACCTACCGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTTGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACGTAAAGCTGGGTGATCTACCGCAGGCAAAAGAATATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACTTAAAGCTGGGTGATCTACCGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTTGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACAGTAAGCTGGGTGACCTGCCGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACTTAAAGCTGGGTGATCTTCAGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACAGTAAGCTGGGTGATCTTCAGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTCATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACTTAAAGCTGGGTGATCTGCCGCAGGCAAAAGAGTATCATGATCGTGCACTGGCCATTCGTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCCACTGCTTACAATAACCTGGGTAATGTACACAGTACGCTGGGTGACCTGCAGCAGGCAAAAGAGTATTACGATCGTGCACTGGCCATTCTTCTGAAAAAGCTCGGACCTGAGCATGTTGATGTCGCAACTGTTCAGCAATCTTTTCACTGTACTGTTGGATGTCATCCCACTCGTTGCAGTGAATTTGAACAAGATGGTCAAGATCCCAGCGACTATCTTCATCAGCTAATTGCAGTTGCACAGAAAAATAAAGGAAAAGTTGTCGCGGTAGGTGAATGTGGCTTAGATTATGACCGGACCCATTTCTGTCCAAAGGAAGTTCAGTTAAAGTATTTTGAGAAACAGTTTCAATTAGCCGAAGAAACCAAACTACCAATGTTTCTACATTCAAGAAGTGCACATCAAGATTTCATTGACATCATCAGACGAAACAGGGATAGATTTGTTGGAGGTGTGGCTCACTGCTTCACCGGCACAAAGGAAGAGGCGACTGATTATCTGGATCAAGGTTTATATATTGGCATCACGGGATGCTCATTAAAAACAGAAGACAACATTGAAGTCATGAAAACAATTCCTTCGGATAGATTACTACTTGAAACAGATGCACCTTGGTGTGATATTCGTCCCACTCACGCCGGTTTTAAGCTCGTTAAAACGAAGTTTGAAAGCAGAAAGAAAGAGAAGTGGGAGGCAGGACTTTGTGTCAAAGGACGCAATGAGCCCGCGAATATCATGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q148G4	Deoxyribonuclease TATDN1 OS=Bos taurus OX=9913 GN=TATDN1 PE=2 SV=1
Q6P8M1	Deoxyribonuclease TATDN1 OS=Mus musculus OX=10090 GN=Tatdn1 PE=1 SV=1
Q6P1N9	Deoxyribonuclease TATDN1 OS=Homo sapiens OX=9606 GN=TATDN1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000117 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01026 all species →	TatD_DNase	TatD related DNase	Domain	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR001130 all species →	Family	3'-5' ssDNA/RNA exonuclease TatD-like	Interproscan
IPR032466 all species →	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051787 all species →	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7372196.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.