Detailed information of KAJ7372206.1 in Desmophyllum pertusum

Genomic Location: MU826838.1:1528392...1535854
NR annotation: KAJ7372206.1, TFIIH basal transcription factor complex helicase XPB subunit [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1RMT1General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Bos taurus OX=9913 GN=ERCC3 PE=2 SV=1
P19447General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Homo sapiens OX=9606 GN=ERCC3 PE=1 SV=1
Q60HG1General transcription and DNA repair factor IIH helicase/translocase subunit XPB OS=Macaca fascicularis OX=9541 GN=ERCC3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004047 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16203
all species →		ERCC3_RAD25_CERCC3/RAD25/XPB C-terminal helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001161
all species →		FamilyHelicase XPB/Ssl2Interproscan
IPR001650
all species →		DomainHelicase, C-terminal domain-likeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050615
all species →		FamilyATP-dependent DNA HelicaseInterproscan
IPR032438
all species →		DomainERCC3/RAD25/XPB helicase, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11274
all species →		RAD25/XP-B DNA REPAIR HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003678
all species →		Molecular FunctionDNA helicase activityInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0006367
all species →		Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0000112
all species →		Cellular Componentnucleotide-excision repair factor 3 complexInterproscan
GO:0005675
all species →		Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0043138
all species →		Molecular Function3'-5' DNA helicase activityInterproscan
GO:0097550
all species →		Cellular Componenttranscription preinitiation complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7372206.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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