Gene detail

Detailed information of KAJ7372866.1 in Desmophyllum pertusum

Genomic Location: MU826834.1:1823088...1862639
NR annotation: KAJ7372866.1, Thioredoxin domain-containing protein 3 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7372866.1

ATGCTGTTCAAGCTGGACTTGTTGATGAAATCATTCAAAAGGTTGAAGAGTCTGGTATGGAGGTTTGAAGAAGGAGGAAAAGATTTTGTCAAAGAAGAAGCTGCAGAGTTTTACAAACAGCACGAAGGGTCTGAGCACTTTGAACAACTGGTGGAATTTATGTCCAGCGGTCCTTGTATGACTTTGTTGCTGAGCAAAGCTGGAGACTCCCCTGATGTTAGTGATGGCACTATTGAATATTTCCGTGATCTCATTGGGCCAAAAGATGTCAACATTGCTAAGGAGGAGGCTCCAACCAGCCTGAGAGCTCTTTATGGAACAGATACTGTGATGAATGCAGTCCATGCCTGTGACTCTGCTGAAAGTGCAGCCAGGGAGCTTGCCTTCTTTTATCCTGACTTTGTGGCTCCTACCGTAATCCAAAAGAGAAAGAAGAAGCGGTTACAGAGGACTCTTGCTCTCATCAGGCCTGATGCACTGCGCACAAGTAGAGAGTCTATCCTTGGAAAGATTCAAGAGGCAGGGTTTACTATTGCAATGTCAAAGGAAATAACACTTTCAAGGGATCAAGCAGAAGCTTTCTATTCAGAACATAAAGACTCAGATTTCTTTGAAACTTTAGTTACAAACATGGCCAGTGGTCCAATGATGGCATTGTGTCTGGCTCGGGAGGATGCTGTGGAAGGTTGGAGAGAAATATTGGGACCAAAGGAGATATCAGTAGCTGCTGAACAGGCTCCTGACAGTTTGAGGCATCAGTTTCAAGTGGAGGACAGTCCTATCAATCCTTTACATGGCTCAGACTCCACTGAGACTGCAGAGAAAGAAATCCAACAGTTCTTCCCTGTTCAGTCCACTGTAGCAGTTATTAAGCCTGAAATGGAACCTGATAAAAGAGAGGAAGTAATGCAATGCATCAAAGAAGCTGGTTTCAAGATTCAGTTTGAAAAAGAGGTGACTCTCACTAAGGATTTAGCATCACAATTCTACCATGAACATGAGGGAAAAGACTTCTACGAAGGCCTCACAGATTATATGTCAAGTGGTCCTACACTATTTCTGGTCCTGACAAGAGAAGATGCAGTCAGTGGTTGGAGAGCTATGATGGGGCCCACTGATCCACAACAAGCCCTAGACCTTGCACCAAACTCTCTTCGTGCACAGTTTGGTGTAGACACAATGAAGAATGCTGTGCATGGCAGTTCTACTGTGGAGAAGGCTGAGAAGATTATTATGGAGTTCTTTCCTGAAGTAGAAATTTTACCTGATGGAACTGTCAAAGTACCACAAGTGGAAGCTGAAGGTGGAGAGGAGGGAGTGACACAGGACATAAAACAAAATCAGCAACCTGATGAGACATTCAGTGAACCACTGGGAATGGAAAATAGTAGCATCCCCAGTGAAGCCATTAAAGCATCATCTGAACTTGATGACCAACACAGTGCATCAAGAGCTCGCCTCAACACCAAGCCTGAAGGAGAACTGAAGGGAGCCTGGGTTCCACTACAAAGTGATGAAAACCAGTGGCTTCAGGTGGACTTTGGGAAAGTAACAAGGCTGGTAAAGATAGCTTTGCAGGGAGAGGCTGGCGAGTCATCCCGTCATGTCAAAGAGTTCAGTGTCTCATATAGCCTTAGTGGAGAGACATTTATACCTTATAGAGAGGACAGCACTGAAAAGGTTTTTGAAAGCAATTCAGACCAGGACACAATTGTATACAACAGTCTTAAGAACCCTGTTATAACCCAGTTCATAAGACTAACTCCAAAGACCTGGAACGAAGACATTGCAATCAGAACTGAGATTTATGGATGCAATGCAGATTTATATAGTGAACCACTGGGAATGGAAAATGGTAGCATCCCCAGTGAAGCCATTAAAGCATCATCTGAACTTGATGACCAACACAGTGCATCAAGAGCTCGCCTCAACACCAAGCCTGAAGGAGAACTGAAGGGAGCCTGGGTTCCACTACAAAGTGATGAAAACCAATGGCTTCAGGTGGACTTTGGGAAAGTTGTTGAGATAACTAAAGTTTGCACTCAAGGTGGTGGTGATAGTGTAGGTCATTGTGTTAGTAGCTATATCCTGCTGTTTGGTGATGACGGAGAAAACTTTCAGGAATATCAGGAAAATAATGAGACAAAGGTGTTTGAAGGGAATTCTGATGGTGACACGGTGGTTAGTCACTGGCTAGTTCAACCTGTCAGAGCATGTTGCTACAGACTACAGCCTAAAACATGGAATGAACAGATTGCATTAAGATTAGAGCTGTTTGGCAAGTTAGCATCAGATGAAAAACAAGATAACCTTCAATCAAAAACCCAGATGAAAATGTACAGGACAGAGCTGAAAGTGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P90666	Thioredoxin domain-containing protein 3 homolog OS=Heliocidaris crassispina OX=1043166 GN=NME8 PE=1 SV=1
Q95YJ5	Thioredoxin domain-containing protein 3 homolog OS=Ciona intestinalis OX=7719 GN=CiIC3 PE=2 SV=1
Q6IRC5	Thioredoxin domain-containing protein 6 OS=Xenopus laevis OX=8355 GN=nme9 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002492 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00334 all species →	NDK	Nucleoside diphosphate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036850 all species →	Homologous_superfamily	Nucleoside diphosphate kinase-like domain superfamily	Interproscan
IPR001564 all species →	Family	Nucleoside diphosphate kinase	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR034907 all species →	Domain	Nucleoside diphosphate kinase-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46161 all species →	NUCLEOSIDE DIPHOSPHATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0006183 all species →	Biological Process	GTP biosynthetic process	Interproscan
GO:0006228 all species →	Biological Process	UTP biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7372866.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.