Detailed information of KAJ7373057.1 in Desmophyllum pertusum

Genomic Location: MU826832.1:464024...471456
NR annotation: KAJ7373057.1, hypothetical protein OS493_014203 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P10881Lupus La protein homolog OS=Bos taurus OX=9913 GN=SSB PE=2 SV=2
P05455Lupus La protein OS=Homo sapiens OX=9606 GN=SSB PE=1 SV=2
P38656Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002938 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05383
all species →
LaLa domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006630
all species →
DomainLa-type HTH domainInterproscan
IPR002344
all species →
FamilyLupus La proteinInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180
all species →
FamilyLa domain containing proteinInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22792
all species →
LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006396
all species →
Biological ProcessRNA processingInterproscan
GO:1990904
all species →
Cellular Componentribonucleoprotein complexInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0008033
all species →
Biological ProcesstRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7373057.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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