Gene detail

Detailed information of KAJ7373357.1 in Desmophyllum pertusum

Genomic Location: MU826831.1:1544466...1585640
NR annotation: KAJ7373357.1, hypothetical protein OS493_012949 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7373357.1

ATGTCAACAACATCATGCAGCGACGAGTTTCATTTTGACCCAGAACAAGTGTTAGAATTTCTTGGCTTGTGTTTGAATAAGCAATGGAAAATTGCAAGAGCTGAATCATCCCCTGCTCTTCAAACATCTTCTATGTTGGACTGTTTGGCAATAATCCAAACAATAATTTCTTTTCTCCAGAAATCCAGTAGTGAACAAAATCTGTGCAACCTATTTGACCAACTGGCCTTGTGTCATATTCAAACACAAAATATTGATAATGGTTGTAGCCAGAGTCCTGCTCACAAGACTGTAAAACCCTGGAAAGATTTGGTGATCGACATGTTGGTTGATCTTTGTATCGTGCTGTTTGATGATCTGTTTTTCCCGGATTGTCGGAGCACAGCTGGGATGGCTATTCTGGTTGTCATCAAAGTGATGTGCCCAGTTGAATATGTTGTGTCAACAGTTGGAAAGTTGATATTCCCATCTTATATTCAATCTGGATACAGAGCTTTCTCTATCTTGAATGACCCAAAGATTGTTTCTATTTTTCAAGATTCTCAAGGGATTGCCAGTTTTTCCCATTTATGTCTTTGCCGTGGAGTCTTGGCTATGATTCCACTTCAGTTTTTAATTCAACCCTCTGAGATTATTTTAAACAACCAAGAAATGAGTGGAACCCTGATGTTTGATGTATTATTTCCAGACTTATGTTGTCTTTGTGATAGTTTAAAGGAATCCAGTAGATCCCTTCTAGCCTTCCGTACTCTGACCATGTGGGCAAATCAGGCCAGGCAAATAGCTATCAGTTATCACTCTGAGGTTTCATGGATAAAGGACAAATTGTATGGCACATCACCTATTCCAACCAAACTTCTGAATTATGTCTGGACCCACTGGGACCATCCAGTTGAGGGAGTACGATATCAAACCAGAATCATTTGTGAACATGTTGTAAAGATGCACTTCATTGCTGCACAGTCTGATTCCAATAAGGACACTTTTCTAAAAGACCTCACAGCATCTCTTCTTAAAGTAAGCTGGCATGTGAGGGGAAAATATGGCCCACTGTGCTGTATCACATCTGTTGTTGGAGCCACAAAGATGCTACTCTGGTTTCCAAAAATTCCTCATGATATGTTTCCTTTGATGAGAGATAGATGCCTTGCCCCTCATATAATGGAGTTTATAGAGAAAATGGCAAGTTCCCACAAACAAGAAATCGTAGTTGCTGGGGAAAACATTGAAGAATGGATGAAGATTTGGATTGTTCCATTGCTCCATTATCTCCATCATGGGTGCAGACTAATGAGAGAACACTTGGCACAGCATTGTCTCCCAAAGTTATTGAAGTGCTGCCCTGAAAGTCTGCAGTTTCTTGTTGAGTATCTTCAAGACAGCAATGGTCCAAAACTAAGTGACCTTGGGACCCTGATTACCTGTTTAAAGATAGCCCGCTCCTCAGGATTAATGGACATCTATAAAAAAAGTCATGAAAAGCTTGCCCTAAAAACCATGTCACTTTGGTGTGGGGTTGTACCAGTGGAGCTTATGAAGAAAGCTTTGTGTCATTTGGATGATCAGATTCGTCTTGATGCCCTTGGACTACTTTGTGATTCTCCTCGAACAACTGAGTCAGTAACAGAGGTTGACTTGCAGCTTCTGCAGTTGTTTATACCTCCAAATATGAACAACCAGGCTCCTTCCTTTAGGCAGCAAGCTGGAGCACATTTCAAAAAGTTCTTAATGAGAGTGAAGGAGGGCATCAGGATATCTAGTAAAGCTATCAAACAGAGAAGAAACATCACTGAGAAGCAGTTTCATCAAGACCAACTTGCTTTATACAGGGAATTTCTGCTATGGTTTTGTGCATGTCAGTTTGATTCCTTGTTTCCTGGTGCATCATTTACCCGTCGCACCACAGCTTTGAGTAGTCTGACGCTGATCAAGCAAATTTTTAGCTTTGAGCAAAGTGATGATTCTGCTACCAAGAGTGATAGTTTTAATATCAATGATGTCATGACCCAGGATAATATTTACATTCTTCTGGATTGTTTGAGTGATTCATATGAAACCAACAAGATGATGGCTTATGACATCCTTTTGGCAACACCTTCTGAGAAGCTTCCATTTCAGGAAGAGAAATCTTTGCTTGGATGGCTAAACATGATTGACAGATTGGTTTCCAGTCCTCGAGCAATAGATGCCTCTAGTGCAGCCACGTTACTAAGGTTACTTGTGGAGAAGTGCAGCTCTCCACTGACATTTAAAAAGCACAAGAGTGAAGAAGACAATGAACCCCTATCCATTGCCTTGAAATCAGAATGTGTACCATGTATGCAGGCCTTCAGAGTATTGAACTATTTAATTGGTTTGTTGAAGTCACACTGCTTAGCTGCCTCAAAGAATTTGTATCTAACTGGTGTCCAAGCCCCTATGCATGGTGTCCTCTATTGCCTAAGAGCAATCCTTGGTTCAATGTCATTCAGCTCCGTTGCAGGTAATGAACAATGGCAGAATCTTATCTCGCATCTCCTAAATGAATGTTTTTGTACAGCAGACATTGTTGCTCCTGTAGTGACCAGTTCCTCACCTGAAGGATTTATGGTGGATGATAATGAAGACCCAGATGAAGACTTAAGTCAGGTTCCTCAATATTCAGTTTTAGAAGAAAGTCATATAAAGGCCCCTGCTGCTCAGATCCTTTTAGTGTGTTGCTGGAGGACTATGAAAGAAGTAGCTTTGTTGTTAGGAGAGCTTGCTGACAATGCTCCATTGCAAGTTGCCAATAACAGAAATGGTTTGTTTACTGCTCAACAGTTGTGCAACATTGGTGGATTCTTTACCAAAGTACTGTTGACTTCAAAACACAGAGGTGCTTTTGAACTAGCATACACTGGCTTTGCTAAACTGTGTGCAGTTTTGTGGAGAAGTACAGATACAGATCTTCGCCAGCTACCAGAGCAATGGCTGCAGACATTATTAGATGACCTTACAAGTGATATTCCATCAGAGGCTTTGTGTGGCACAAGAAGGAGTGCTGGTGTACCATTTTTTATTCAGGCTATTGTGACAACTGAACCATCAGCAGCTGCAAGAGCATGCTTCAAACGAGTCATGATTGAGTTGTTGCGAATAGCATCTAAACCAACTGGGGATTTTAAGATCTGTGATTCAACTCTCCCACAGGTTCATGCTTGCAACATCCTTCGTGCCTTGTACCGTGAAACTAAACTTGGTGAGGGTGTGTTTCCTTTTGTATCTGATGGAGTAGTTGTGGCTATCAATGGATTCCACTCTGACAGCTGGGCAGTACGCAACTCATCCACATTACTGTTCAGTGCACTGGTGACCAGGATATTTGGAGTAAAGAGAGGCAGGGATGAGCATTCTAGAAAGAACTGTATGACAGGGAGAGAATTCTTCTCCAGGTTTCCAGAGCTTCATTCATTCTTCCAAAGTCATTTACAAGTTGCGTGTCAAGGAATTGACAGGGACAATACCATCCACCCCAGCCTTTATCCTGTCCTGGTAATATTGTCTCGTCTGTATCCATCAACTATGGACGGTGTTGACACAGTACTCAGCATGGCAGTGTTTGTACCTTATGTTATCAGCTGCAGAAAAAGTATGGTTATCAAGACTCGACTTATGTCTTCCCGAGCTATTGTTCCTCTAGTATCTGGTGATTTATTAGTTCAAACTCTTCAGAAGCTTCTTCTTTCCCTCCCATTGAGAAATGCATCACTACACAGATTGAAACTACCCAACAACAACCAGATCCTAAACACTACACAGATTGAAACTACCCAACAACAACCAGATCCTAAGAACAACAAATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8C750	tRNA (32-2'-O)-methyltransferase regulator THADA OS=Canis lupus familiaris OX=9615 GN=THADA PE=2 SV=1
Q6YHU6	tRNA (32-2'-O)-methyltransferase regulator THADA OS=Homo sapiens OX=9606 GN=THADA PE=1 SV=1
A8C752	tRNA (32-2'-O)-methyltransferase regulator THADA OS=Chlorocebus aethiops OX=9534 GN=THADA PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001294 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10350 all species →	DUF2428	THADA/TRM732, DUF2428	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019442 all species →	Domain	THADA/TRM732, DUF2428	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR051954 all species →	Family	tRNA (32-2'-O)-methyltransferase regulator THADA	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14387 all species →	THADA/DEATH RECEPTOR INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030488 all species →	Biological Process	tRNA methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11492	NCAPG2, LUZP5; condensin-2 complex subunit G2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.