Gene detail

Detailed information of KAJ7373668.1 in Desmophyllum pertusum

Genomic Location: MU826830.1:2400139...2413558
NR annotation: KAJ7373668.1, MutS protein msh4 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99MT2	MutS protein homolog 4 OS=Mus musculus OX=10090 GN=Msh4 PE=2 SV=1
O15457	MutS protein homolog 4 OS=Homo sapiens OX=9606 GN=MSH4 PE=1 SV=2
F4JP48	DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana OX=3702 GN=MSH4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003439 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05188 all species →	MutS_II	MutS domain II	Domain	Interproscan
PF05192 all species →	MutS_III	MutS domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045076 all species →	Family	DNA mismatch repair MutS family	Interproscan
IPR036678 all species →	Homologous_superfamily	MutS, connector domain superfamily	Interproscan
IPR036187 all species →	Homologous_superfamily	DNA mismatch repair protein MutS, core domain superfamily	Interproscan
IPR007860 all species →	Domain	DNA mismatch repair protein MutS, connector domain	Interproscan
IPR007696 all species →	Domain	DNA mismatch repair protein MutS, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11361 all species →	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003690 all species →	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006298 all species →	Biological Process	mismatch repair	Interproscan
GO:0007131 all species →	Biological Process	reciprocal meiotic recombination	Interproscan
GO:0030983 all species →	Molecular Function	mismatched DNA binding	Interproscan
GO:0140664 all species →	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7373668.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.