Gene detail

Detailed information of KAJ7374233.1 in Desmophyllum pertusum

Genomic Location: MU826828.1:702480...725920
NR annotation: KAJ7374233.1, hypothetical protein OS493_007310 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7374233.1

ATGGACGACGATCCAGAAATTCAGGCAGGAATGCATCAAAAACCACTACACTCTTCTTACGAGAACGTGAATAGAGACGACTCCAGTCACCAATACGAGGACCCGGATAAACCCGCCAACGAGGTGTTCCACAGCCAGAATCGAGAAATGCCTCTCCCCGTCCCGAATAGATCACAAGGTGAGCCAGTCCACTCGAAGCAGCGCGAACGAACATTCGCGAACGAATCGGACTCGTGTGGAGGCTACCACCGTAATGCTTGCTCCAAGCTGTTCAAAGTGATGGCTTTTACTGGATTTTTAATCGCACTGGCTGCTTTAGCTGTGGTTGTGTTGCTTATGCTGGGAATGCTCTCTACCCCGAGTTGTCGCGATTGCAAGAAGGAACTTGTGCCAGGCCAAACGACCGGATCCTCTGGCGCCCAAGCCGTCGGATCGATTCAAGAATTATGGAATGTAGTCAAGGAACTTAGGTCAAGCGTGAGAGAATTGAACGCGTCTGTGAAAATGAAAGACGAAATCATCTCGCAACTTCAGAAGCGAGATCTCGAGCACACTGACAAGATCGCAGAACTGGAGCGAAATGTCAGTCATAAAGTGTTAGTCGTTAACGACACCAAATTCAATTTCAGCAGCCTCGTCGGGCCGCGGGGCCCACCCGGAATTGACGGGGTTCCTGGTACTAAAGGCTTGGATGGTTTGGTCGGGAAACCGGGGAAGCCAGGCCCAGGGAACATGTCTTTGTGTCGTTATATGAAGGAAGAGAGTGTCCTGTTTACAGCGGAAGCATCCAAAGGACAAAATGTCATCGTGAGGGAGCAACGAGCGTCCAGGATCATCGGCGTCACTTGTTCAACTCTTGGAACATCGGAATATAATTTAGTCAGTCAGTTAGATGCCTCCAACATGAGACACTTCTCCAATAAAGCAATTGCAGCTAAGGAGGAAATCTGCCAAGAGCCCAAGTTCTTCACCAAAGGAATAAGCCGAACAGACGTCGCTCAAGGACGAATGTTAAACTGCTGGTTTGTGGCCGCCGTGGCTTCACTGACAGACGCGGAGGAGTTGTTCTATGCAGTGTGTCCGCCTGATCAAGGCTTTGATCCGGGTACTTACTGCGGAATGTTCAGATTTAACTTCTGGCGATTTGGTGAATGGGTGGAGGTCATCATTGACGACTTTCTCCCGACACACAATAACAAGTTATATTATTCTCGCTCAAGTGACCCCAACGAATTCTGGAGCGCTTTGATGGAGAAGGCTTATGCCAAAGTCTGCGGATCCTATGAGGCCATGGGCTTGGGACGTATTAGTGAAGCTCTGCAGGATTTTACAGGTGGAGTTATTGAGACGATAAACCTGCAAACGCCTCCGCCAGACTTGTATAAAGTCTTACAAAAGGCGCTTGAGCGGCACTCACTGATGGGTACTTCGATTGAGACAGGTTCAGAAACTATTCAAAGATCATTATCAAATGGTCTTATAAGCGGTCATGCTTATTCGATAACAGGCTTTAGCAAGGTTACTGTCCATGGAATACCTGATGTCAAACTAATTCGTATCCGAAACCCTCATGGCAATAGTGCAGAATGGAAGGGACCTTGGAGTGACAGGTCTTACGAGTGGAATGACTTATCAACAGAAGAACGAAAGAGACTAAATCTGGTGTTTGAAGATGACGGAGAATTTTGGATGTCAATGGAAGATTTTCAGACGAATTTCACACGAGTAGAGATATGCATGCTTACTCCAGACAGTGTTTTGGAGGACGACGAGAAGAAATCATGGAAGGTAGTGCGAGAGAAAGGCCGCTGGCAGGCTGATGCTACTGCGGGCGGCTGTAGGAACTTCATAGATACTTTCCACATCAATCCTCAAATAAGGATCAAGTTACAAGATCAGGACGAGGACGATGACGTTCCAGAAGACATGCTTGATACAAAAGAGAGGTTCGACAGAAGATTTTTCGAGACGAACAAGGCCAAAGTAATGACGAACTCCTTCACTAAACTGAGAGAGATCAGCTGCCGATACGCACTGCCACAAGGAGAGTACGTCTTAGTCCCGTCCACGTTTCACCCGCGTCAGGAAGCAGATTTCCTTTTAAGAATATTTTCGGAGAAACCACACGAAGCACGTGAAATTGACGTGGAAACGAAAATAATTACTCTACCAAAGCCCGTAGTTTCATCAGAGGAGGCTGGAGACATCGATAAACAATTTTGGAGCACATTCCAACAATTTTCAGGAGAGGATGGGGAAATTGATCAATATGAGCTACAGGAAATCTTGAGCCGAGCTTTTTCCACTTTGATGAATTCTAACTCGTTTAGCCTGGAAGCTTGCAGGAGCATGATTGCAATGTTCGATAACGGGAGCGCTGGATACAGCGAGTTCAGAGGGCTGTGGACGATGCTAGGCCATTGGAAGGAAGTTTTCCATCGTTTTGACGTAGATCAAAGTGGCGATATGAACTTGTATGAGCTCCGTGATGCTCTCCGCGCGCTAGGTTATCAAATCAATAACAATGCTCTAAGCAACATTATCCTGCGTCACCACAACAAGAAAGGAACTATTCCATTCGACATCTTCATACAGATTTTAGTGCGAGTTATAGTCATGTCCGATACTTTCAGGAGGCACACGATCAAACGCGGCCGACGAGCAGACAAGGCAATATTTACTCTTGATGACTTCATCGAAGCTACCTGCAGTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35920	Calpain-9 OS=Rattus norvegicus OX=10116 GN=Capn9 PE=2 SV=2
Q9D805	Calpain-9 OS=Mus musculus OX=10090 GN=Capn9 PE=2 SV=2
O35350	Calpain-1 catalytic subunit OS=Mus musculus OX=10090 GN=Capn1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000851 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00648 all species →	Peptidase_C2	Calpain family cysteine protease	Family	Interproscan
PF13405 all species →	EF-hand_6	EF-hand domain	Domain	Interproscan
PF01067 all species →	Calpain_III	Calpain large subunit, domain III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001300 all species →	Domain	Peptidase C2, calpain, catalytic domain	Interproscan
IPR022683 all species →	Domain	Peptidase C2, calpain, domain III	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR022684 all species →	Family	Peptidase C2, calpain family	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR050420 all species →	Family	Calpain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR036213 all species →	Homologous_superfamily	Calpain large subunit, domain III superfamily	Interproscan
IPR022682 all species →	Domain	Peptidase C2, calpain, large subunit, domain III	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10183 all species →	CALPAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004198 all species →	Molecular Function	calcium-dependent cysteine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01367	CAPN1; calpain-1	EC:3.4.22.52	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.