Detailed information of KAJ7374996.1 in Desmophyllum pertusum

Genomic Location: MU826826.1:447100...454744
NR annotation: KAJ7374996.1, Poly(A)+ RNA export protein rae1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZWF0mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2
Q8C570mRNA export factor OS=Mus musculus OX=10090 GN=Rae1 PE=1 SV=1
A5GFN6mRNA export factor OS=Sus scrofa OX=9823 GN=RAE1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002173 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for KAJ7374996.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10971
all species →
MRNA EXPORT FACTOR AND BUB3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000972
all species →
Biological Processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005643
all species →
Cellular Componentnuclear poreInterproscan
GO:0006405
all species →
Biological ProcessRNA export from nucleusInterproscan
GO:0043130
all species →
Molecular Functionubiquitin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7374996.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP