Gene detail

Detailed information of KAJ7376327.1 in Desmophyllum pertusum

Genomic Location: MU826403.1:247617...253394
NR annotation: KAJ7376327.1, arachidonate 5-lipoxygenase [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7376327.1

ATGATCAATCAAGACCCGAAGACGGGATTTCCTCTCCCACATCCCCTCCCACAAACACAAAACTCAGAGAGAAACAAACACACACCCGATCGTAAATGTATTCCATCGTTGTATTGTTTGTTTTCAAAGCCTCTTCCTCCACCTGGAATTTTTGACAACATCAAAATCGCATACAGCACTACCAAACTCAAGATGCTCTTCGGTACAAAGGCTCTAATCAAGGGACAACGGGCAACCCACCCGGTTGGAGTTGGCGCCGAGGGAAACGCGTCAATTGTCTCTAATCCCAAGTTCCCAAAACACGAGTTCTTTGCCCTGGACGATCATTTCCAGTCTGTCTGCGTCACGCCACCACCCAGTCAGTTGATGACGTGCTGCTCGATTTGTGCAGCGGAGCGTTTGAGGTTTGCCGGAAGTGACGATGAGGAAAGTCCATGCGACCTCCTGATGGGAACTGGGCCAACAACTGCTTTGTGGAACGCGCAAGCCATCTTTGACGCAGTGACAGCCAGGGTTACAGGAGATATTAAAGCTTATCTTCTGCTCGATCCCGACCGCATCAAAGCCAACATTGGCGGTCTGCGACAAAAACCCGACTCGTTTTATGACCAGCGGTATTACACGGAAGTGATTTTCGATTTCAAGGCGTTGGATGGAGTAAAGCGTTACGTCAGATTCCGGCTGATTCCTGCTGACGGGCGACCGGAAACAGGTTTATTGTCTGAAGAAGTCCAGTGGCAACCTTGGGTGGACGGAAGGTCACCTACTGAGACTTTACCAAAAGATTACCTCAAGCGTGAGTACAAAGAGCGAATAACCCGGGGAGCACTCGAGTACAAACTCCAGCTACAACTCCACGAAGCTAAGGACGATGATCCGCCAACGACACTTCACATCGGGAGAGAATGGGACGAGAGTACACATCCATGGTTAGATTTGGCTGACATCAAAATGACGTCATTACTTTCTCCAACAGCAACGGAGCGTCTAAAGTTTATTCATAGCAACTTGCCATCCACCATAGCGTTATTGCCGGCCCAGTCTGTTGACGATCCTAATGTTGTTGTCCACATTCGCAACGCTGTGTATGCCTGGTGTCAGAAGATACGCTCCATGAGGTCAAGCAAGCTCGTCCCAGACCACATGGCGTCCTATCACATCCGAGTACAAACTGGAAACCAGTCAGGAGCGGGTACGGATGCTTCCATTTCCATTTCACTGACAGGAACCAAAGGAAAGACCGATCTGATCAAATTAGACTCCTGGGGCAATGACTTTGAAGCAGGAGAGGCGGACGAGTATTCTATAGAGGCGATGGATGTCGGGAAAGTTCTAATGATCCACCTTCACAACGACGGCGGTGGCTGGTGGTACAAGAATCCTGATTGGTTTGTTAACAAGATCTCAGTGCTTAGCTCTACGCAGGATGACCCATTCGAGTTTCCCTGCTATCGCTGGGTGCTGTCAGATTTGGTTGTCTTTGAGGGAAAAGCCATTCCGCCCTTCCACGACCAACCAGATGCCGTTAAAAGCCAACGAAGCCTTGAACTAAAGCAGCGCCAGGAGATTTATAAGTGGGGAAACCAAGAGGTCTTCCAACACCTACCTGGCTATCTTCAAGCTTCGGCACACGCTGATATCCCAAGAGATTCTCAATTCTCCAACGAAGCCAAAAGTACCATCAAGGAAGACAAGGAAAAGGCGGTTATGGACATCGGCCTCGCTTCTTTGGCAACACTTTTCGACAGCTGGGATAATTTTGACGACTTCCAAAAGATCCTTAACAGAGCATATGGTGGCGTACCGAAGATTGTCGAAGGTGATCGGTGGATGACCGATAAGGTCTTCGGATCCATGTTCTTGAATGGCTGCAACCCGAATACTATCCAGCGGTGCGAGAAATTGCCAAGTAATTTTCCTGTTACTGAAGAGATGGTGAAAAGCTTTCTGGATCGTGGTCAAACACTGGAAAAGGAGATAAAGGCAGGGCACGTATACATTGTAGATTACAAAGAGCTTGCAGGTATTAACATCACAGGGGAGTCCACCCACACTGCGCATCCCATGGGACTCTTTTACGTGAAGGCCTCCCGTGACCTGGTACCCATCGCCATTCAACTGCTCCAGCAACCGAGCAATACCAACCCGATATGGACTCCAAGCGATTCTCAATATGACTGGCTCCTAGCAAAGATGTGGCTCCGTAACGCCGACAGTCAAATACAACAGGTATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O16025	Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla OX=47982 PE=1 SV=1
P48999	Polyunsaturated fatty acid 5-lipoxygenase OS=Mus musculus OX=10090 GN=Alox5 PE=1 SV=3
P12527	Polyunsaturated fatty acid 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000523 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00305 all species →	Lipoxygenase	Lipoxygenase	Domain	Interproscan
PF01477 all species →	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013819 all species →	Domain	Lipoxygenase, C-terminal	Interproscan
IPR036226 all species →	Homologous_superfamily	Lipoxigenase, C-terminal domain superfamily	Interproscan
IPR020835 all species →	Homologous_superfamily	Catalase superfamily	Interproscan
IPR000907 all species →	Family	Lipoxygenase	Interproscan
IPR001024 all species →	Domain	PLAT/LH2 domain	Interproscan
IPR036392 all species →	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11771 all species →	LIPOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016702 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0034440 all species →	Biological Process	lipid oxidation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7376327.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.