Gene detail

Detailed information of KAJ7376668.1 in Desmophyllum pertusum

Genomic Location: MU826394.1:466866...488859
NR annotation: KAJ7376668.1, ATPase, P-type (transporting), HAD super, sub IC [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7376668.1

ATGGCTTCCGTGACTCGACTTATTGCTCTTGGAATTGGTATTTTTATTTGCTGTTTTCAAAGTGTTATCGGAAGACAACCGCATATTGTCTTTATTTTAGCAGATGATTATGGTTTTAACGACGTCGGATACCACAATCCACGCATAAAAACTCCGAATCTTGACAGTTTGGCTGCTGGTGGGGTGCGCCTGGAAAATTATTACGTTCAACCAATTTGCACCCCAACCCGAAGTCAGTTGTTTTCTGGCAGATATCAGATTCACACTGGCCTGCAACACGGGATCATCTGGCCTTCCCAGGCAAATGCACTGCCCAAGAATGATACTACAATTGCCACTTACCAGGCTGTTCATTCACCACTTGAGGTACCTGCACAGTACACAGAGCAGTACAAAGATATAGACAACTACGCTCGCCGAACATATGCAGGCATGGTTAGCTGTATGGACGAAGGGATTGGAAACATAACACAAGCTCTACAGAAGCATGGCTTGTGGGATGACACAGTACTATTTTCAGTACTGACAATGGTGGTCAAATATATTCTGGCGGCAATAACTGGCCATTACGCGGCTGGAAAGATTAACATGGAAATGATCCATGTCACCGACTGGCTTCCAACAATTGTCCACCTGTCGGGAGGATCTGTTGACAGCATGCCTTTGGATGGTTACAATGTCTGGGAAACATTGAGCAGTGGAGAACCCTCGCCAAGAACGGAGATATTGCATAATGTTGACCCTATAGATGCTTATTGGGACAGCCACTTTGAGTCTTATCATCACTGCCGACAAGCTGCCATACGAGTTGGCGACTGGAAACTTTTGACAGGTTGTCCAGGAAATGGGAGTTGGATTCCACCGCCAGAGAGTTCCTATCTGTTTGAGCATGGACCAAATTACCATGACAACATCAACAGCACCTTTCTTTTCAACATAAGAGAGGATCCTGAAGAACGAAATGAACTATCTGCGGTATATCCAGATAAGGTGGCTTTCTTGATGCAGAGGATCAGGGAATACAATGCAACAGCTGTACCAGTACGTTACCCAGATCCAGATCCTGCGTCATTACCAGAGCTGCATGTTTTGAAACAATTTCGGAGTGATCCTGTACGCGGTTTGACACACGATGAAGTCGAGAGGCGACGGAAGCTACATGGGTTAAACGAATTTGATCATGTAGAGGAAACGCCGCTCTGGAGAAAATATATTGACCAGTTTAAAGAGCCTATGATTGTGTTACTGCTGGCTTCAGGCCTGGTTAGTGTAACTATGGGTCAGTATGATGATGCTGTTAGCATAACAGTGGCCATAATAATAGTTGTTACAGTAGCATTTGTCCAGGAATACCGTTCCGACAAGTCAGTAGAAGCCATCAAGAAACTTGTCCCACCTGGCTGTCATTGTATACGCGAAGGCCAAGTATCAGATTTTTTGGCTCGCAGTTTAGTTCCAGGAGATTTAGTCACCATATCAGTAGGAGATAGAGTTCCAGCAGATTTAAGGCTAATTGAGGCTGTAGATTTAAAAATAGATGAATCAAGTTTTACTGGTGAGACTGAACCAGCAACTAAGACAACAGATATGATTCCTCCATCCAAATCAAGTGGAGGCATCTCACAAAGAAGAAATATCGCTTTTATGGGCACTTTAGTCCGCTGTGGCCGTGGCAAGGGTATAGTCACTGGAACTGGTGAAAATTCAGAGTTTGGTGAAGTGTTTAAAATGATGAAAGCAGAGGAACCTCCAAAGACCCCACTTCAAAAAAGCATGGACATCTTAGGAAAACAATTATCTTTTTATTCTCTTTGTATTATAGGTCTTATTATTCTTTTGGGTTGGCTACAAAAGAGAGGCATTCTAGAGATGTTTACCATTGGAGTCAGCTTGGCAGTAGCTGCCATCCCAGAGGGTCTTCCTATTGTAGTCACTGTTACTCTGGCACTTGGTGTAATGCGGATGGCCAGAAGAAATGCTATTGTAAAAAAGCTACCTATTGTGGAGACTCTTGGGTGTGCTAGCGTTATTTGTTCGGACAAGACCGGTACACTTACCAAGAATGAAATGACAGTAACGCAGATATTCACTGCCGATGGACACTATGCAGAGGTTTCAGGAGTAGGGTACAATGGGTGTGGTCATGTAACCATCGCAGGCCAAACTCTAACACCAAACAGCAACTTGTCCATTACTAAGGCCATGGAGCTTGGTATTAATGACCCAAGAAGAATGTACACACGCACAGAAGAAATCTCTTTTAGCTCCGAGAAGAAGTGGATGGCTGTTAGGTACAGAAGACAGGACAATTCAGAGGTGTATTACGTGAAGGGAGCACCTGAGAAGGTGTTACAGCAGTGTACATCATACAGCAGACAAGGCTCTGTTGTTCCTCTTGTTGCCAAGGATTTGGAGCTGTTTGCTGATGCTGTGGCTGCTATGTCATCCAAAGGACTTAGAGTCATAGCTCTGGCCACGGGGTCTGACTTGCAGCAGCTGTCGTTCCTGGGTATAATGGGTCTGCTGGACCCGCCCAGACCCGGGGTACGTGAGGCTGTCCATACACTGTTAGAGAGTGGAGTACAAGTCAAGATGCTGACAGGAGATGCGCGGGAGACTGCACTTACTATTGCGGAAATCCTGGGAATTCATGTCAAAGGACGGTTAACGTTATCGGGAGAAGAGTTGGAAGGGATGGATAGTTTGCAATTAGGAGATGCCATACAACAGGCTTCAGTGTTTTATCGAGTCAGTCCCAGACATAAAGTAGCTATTGTTAAGGCTCTTCAGAAGCGTGATCACGTGGTAGCGATGACTGGTGACGGTGTAAATGACGCAGTTGCTCTGCGCCGGGCTGATATCGGCGTGGCCATGGGTCGAGCGGGGACTGATGTGAGTAAGGAGGCAGCGGACATGGTGTTGGTGAATGATGACTTCTCCACCATCTTGGCTGCCATCGAGGAAGGCAAAGGAATATTTTACAACATACGAAACTTTGTCCGTTTCCAGTTGAGCACGAGCATTGCAGCGATTTCTTTAATCACAATATCGACGTTTCTGAAACTTCCCAACCCTTTGAATGCCATGCAGATTTTATGGATCAATATCATAATGGATGGGCCTCCTGCCCAGAGTCTTGGCGTGGAACCGGTGGACCGTGACGTCATGAATAAGCCCCCGCGAAACGTCAAGAACCCAATGATCACCAGGGCCCTTATATTGAACGTGCTGCTGGCCGCTAGTGTTATAGTGACTGGTACACTGTGGGTCTTCTGGAGGGAGATGAGAGACAACATTATCACTCCACGTGACACAACCATGACGTTCACGTGCTTTGTGTTCTTTGACATGTTCAACGCGCTAAGCTGCCGTTCACAGGTCAAGTCGATCTTCCAAACAGGTTTCTTCACAAACCGTATGTTCCTTTACGCTGTTGGTGGTTCTCTCATGGGACAGATGTTAGTAATTTACTTCCCTCCTCTTCAAGCAGTGTTTCTCACCGAAGCTCTTCATTGTACGGACATATTGTTACTAACCTGCGTTGCATCCTCCGTTTTTATCGTGGACGAGATCAGGAAAATGGTTTTAAGGACGCTTTCTAGACGCAAACAACTTCCAAAGGACTTCCAGTATTACGTGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P98194	Calcium-transporting ATPase type 2C member 1 OS=Homo sapiens OX=9606 GN=ATP2C1 PE=1 SV=3
P57709	Calcium-transporting ATPase type 2C member 1 OS=Bos taurus OX=9913 GN=ATP2C1 PE=2 SV=1
Q5R5K5	Calcium-transporting ATPase type 2C member 1 OS=Pongo abelii OX=9601 GN=ATP2C1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001630 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00690 all species →	Cation_ATPase_N	Cation transporter/ATPase, N-terminus	Domain	Interproscan
PF00884 all species →	Sulfatase	Sulfatase	Family	Interproscan
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF00689 all species →	Cation_ATPase_C	Cation transporting ATPase, C-terminus	Family	Interproscan
PF00122 all species →	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004014 all species →	Domain	Cation-transporting P-type ATPase, N-terminal	Interproscan
IPR006413 all species →	Family	P-type ATPase, subfamily IIA, PMR1-type	Interproscan
IPR001757 all species →	Family	P-type ATPase	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR044492 all species →	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR000917 all species →	Domain	Sulfatase, N-terminal	Interproscan
IPR018303 all species →	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR023299 all species →	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR008250 all species →	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR006068 all species →	Domain	Cation-transporting P-type ATPase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42861 all species →	CALCIUM-TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005388 all species →	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0006816 all species →	Biological Process	calcium ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005215 all species →	Molecular Function	transporter activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006828 all species →	Biological Process	manganese ion transport	Interproscan
GO:0006874 all species →	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0015662 all species →	Molecular Function	P-type ion transporter activity	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0034220 all species →	Biological Process	monoatomic ion transmembrane transport	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7376668.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.