Gene detail

Detailed information of KAJ7377863.1 in Desmophyllum pertusum

Genomic Location: MU826371.1:107232...110573
NR annotation: KAJ7377863.1, Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9YI36	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Columba livia OX=8932 GN=SUCLG2 PE=1 SV=1
P53590	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa OX=9823 GN=SUCLG2 PE=1 SV=2
Q96I99	Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Homo sapiens OX=9606 GN=SUCLG2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001643 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08442 all species →	ATP-grasp_2	ATP-grasp domain	Domain	Interproscan
PF00549 all species →	Ligase_CoA	CoA-ligase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016102 all species →	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR005809 all species →	Family	Succinate--CoA ligase-like, beta subunit	Interproscan
IPR013650 all species →	Domain	ATP-grasp fold, succinyl-CoA synthetase-type	Interproscan
IPR017866 all species →	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan
IPR005811 all species →	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11815 all species →	SUCCINYL-COA SYNTHETASE BETA CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004776 all species →	Molecular Function	succinate-CoA ligase (GDP-forming) activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006104 all species →	Biological Process	succinyl-CoA metabolic process	Interproscan
GO:0042709 all species →	Cellular Component	succinate-CoA ligase complex	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7377863.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.