Genomic Location: MU826369.1:994018...1001783
NR annotation: KAJ7378148.1, Pre-mRNA-splicing factor SYF1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families
| CDS |
| KAJ7378148.1 |
| Protein |
| KAJ7378148.1 |
| UniProt accession | Description |
|---|---|
| Q9HCS7 | Pre-mRNA-splicing factor SYF1 OS=Homo sapiens OX=9606 GN=XAB2 PE=1 SV=2 |
| Q9DCD2 | Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1 |
| Q99PK0 | Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus OX=10116 GN=Xab2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005181 (this species only) · gene tree & orthology |
KAJ7378148.1 in Desmophyllum pertusum.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR045075 all species → | Family | Pre-mRNA-splicing factor Syf1-like | Interproscan |
| IPR003107 all species → | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11246 all species → | PRE-MRNA SPLICING FACTOR | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000349 all species → | Biological Process | generation of catalytic spliceosome for first transesterification step | Interproscan |
| GO:0000398 all species → | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0000974 all species → | Cellular Component | Prp19 complex | Interproscan |
| GO:0071007 all species → | Cellular Component | U2-type catalytic step 2 spliceosome | Interproscan |
| GO:0071014 all species → | Cellular Component | post-mRNA release spliceosomal complex | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
KAJ7378148.1.
