Detailed information of KAJ7378488.1 in Desmophyllum pertusum

Genomic Location: MU826366.1:946648...951583
NR annotation: KAJ7378488.1, DNA-binding protein satb2 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008411 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16557
all species →		CUTLCUT1-like DNA-binding domain of SATBDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032355
all species →		DomainSATB, CUT1-like DNA-binding domainInterproscan
IPR038216
all species →		Homologous_superfamilySATB, CUTL domain superfamilyInterproscan
IPR039673
all species →		FamilyDNA-binding protein SATB1/SATB2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15116
all species →		DNA-BINDING PROTEIN SATB FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7378488.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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