Detailed information of KAJ7378541.1 in Desmophyllum pertusum

Genomic Location: MU826365.1:874444...878187
NR annotation: KAJ7378541.1, Crooked neck-like protein 1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P63154Crooked neck-like protein 1 OS=Mus musculus OX=10090 GN=Crnkl1 PE=1 SV=1
P63155Crooked neck-like protein 1 OS=Rattus norvegicus OX=10116 GN=Crnkl1 PE=2 SV=1
Q9BZJ0Crooked neck-like protein 1 OS=Homo sapiens OX=9606 GN=CRNKL1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004242 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02184
all species →		HATHAT (Half-A-TPR) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003107
all species →		RepeatHAT (Half-A-TPR) repeatInterproscan
IPR045075
all species →		FamilyPre-mRNA-splicing factor Syf1-likeInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11246
all species →		PRE-MRNA SPLICING FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0000245
all species →		Biological Processspliceosomal complex assemblyInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974
all species →		Cellular ComponentPrp19 complexInterproscan
GO:0071007
all species →		Cellular ComponentU2-type catalytic step 2 spliceosomeInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan
GO:0071014
all species →		Cellular Componentpost-mRNA release spliceosomal complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7378541.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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