Detailed information of KAJ7379152.1 in Desmophyllum pertusum

Genomic Location: MU826359.1:527806...537382
NR annotation: KAJ7379152.1, maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75691Small subunit processome component 20 homolog OS=Homo sapiens OX=9606 GN=UTP20 PE=1 SV=3
Q5XG71Small subunit processome component 20 homolog OS=Mus musculus OX=10090 GN=Utp20 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002640 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07539
all species →		UTP20_NU3 small nucleolar RNA-associated protein 20, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011430
all species →		DomainU3 small nucleolar RNA-associated protein 20, N-terminalInterproscan
IPR052575
all species →		FamilySmall subunit processome component 20Interproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17695
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7379152.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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