Detailed information of KAJ7380477.1 in Desmophyllum pertusum

Genomic Location: MU826353.1:1831372...1833194
NR annotation: KAJ7380477.1, Hypoxia-inducible factor 1-alpha [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0PGG7Hypoxia-inducible factor 1-alpha OS=Bos mutus grunniens OX=30521 GN=HIF1A PE=2 SV=1
Q9XTA5Hypoxia-inducible factor 1-alpha OS=Bos taurus OX=9913 GN=HIF1A PE=2 SV=1
Q61221Hypoxia-inducible factor 1-alpha OS=Mus musculus OX=10090 GN=Hif1a PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004064 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14598
all species →
PAS_11PAS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014
all species →
DomainPAS domainInterproscan
IPR035965
all species →
Homologous_superfamilyPAS domain superfamilyInterproscan
IPR001610
all species →
RepeatPAC motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23043
all species →
HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7380477.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP